Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC018645.3-201ENST00000628855 2646 ntBASIC12.24□□□□□ -0.45
CLK1P49759 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CLK1P49759 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC12.23□□□□□ -0.45
CLK1P49759 FCHSD1-201ENST00000435817 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 DOCK10-201ENST00000258390 7260 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
CLK1P49759 PTGER3-206ENST00000370924 6982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC12.23□□□□□ -0.45
CLK1P49759 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 SETD7-201ENST00000274031 7365 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 USP33-204ENST00000370794 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
CLK1P49759 CAGE1-201ENST00000296742 2821 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 AP000350.6-201ENST00000609510 5637 ntBASIC12.23□□□□□ -0.45
CLK1P49759 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC12.23□□□□□ -0.45
CLK1P49759 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CLK1P49759 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC12.23□□□□□ -0.45
CLK1P49759 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC12.23□□□□□ -0.45
CLK1P49759 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC12.23□□□□□ -0.45
CLK1P49759 SRP19-206ENST00000515463 660 ntTSL 3 BASIC12.23□□□□□ -0.45
CLK1P49759 AP003398.1-201ENST00000531124 318 ntBASIC12.23□□□□□ -0.45
CLK1P49759 CR383656.3-201ENST00000551315 183 ntBASIC12.23□□□□□ -0.45
CLK1P49759 FOS-206ENST00000555347 1280 ntTSL 2 BASIC12.23□□□□□ -0.45
CLK1P49759 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC12.23□□□□□ -0.45
CLK1P49759 AC135983.4-201ENST00000564116 1262 ntBASIC12.23□□□□□ -0.45
CLK1P49759 COX5A-205ENST00000568517 582 ntTSL 3 BASIC12.23□□□□□ -0.45
CLK1P49759 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC12.23□□□□□ -0.45
CLK1P49759 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC12.23□□□□□ -0.45
CLK1P49759 WDR7-208ENST00000589935 544 ntTSL 4 BASIC12.23□□□□□ -0.45
CLK1P49759 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC12.23□□□□□ -0.45
CLK1P49759 AC073352.2-201ENST00000609385 439 ntBASIC12.23□□□□□ -0.45
CLK1P49759 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 AC137723.2-201ENST00000623540 398 ntBASIC12.23□□□□□ -0.45
CLK1P49759 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC12.23□□□□□ -0.45
CLK1P49759 IDS-201ENST00000340855 7619 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 STAG1-203ENST00000434713 5064 ntTSL 5 BASIC12.23□□□□□ -0.45
CLK1P49759 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 LINC02473-201ENST00000569621 2195 ntTSL 2 BASIC12.23□□□□□ -0.45
CLK1P49759 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 AL031714.1-201ENST00000567829 2926 ntTSL 5 BASIC12.23□□□□□ -0.45
CLK1P49759 TUBGCP4-208ENST00000564079 6798 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC12.23□□□□□ -0.45
CLK1P49759 FKBP4-201ENST00000001008 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC12.23□□□□□ -0.45
CLK1P49759 ESPNL-206ENST00000612395 3673 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 RBM20-201ENST00000369519 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CLK1P49759 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CLK1P49759 GPT2-202ENST00000440783 4228 ntTSL 2 BASIC12.22□□□□□ -0.45
CLK1P49759 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC12.22□□□□□ -0.45
CLK1P49759 COL20A1-201ENST00000358894 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 SNAP91-212ENST00000520302 4136 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 LINC00540-203ENST00000631321 2412 ntTSL 2 BASIC12.22□□□□□ -0.45
CLK1P49759 AC011511.5-201ENST00000589379 3219 ntBASIC12.22□□□□□ -0.45
CLK1P49759 SIGLEC11-203ENST00000447370 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC12.22□□□□□ -0.45
CLK1P49759 ANKRD34B-201ENST00000338682 3938 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 SLC4A9-201ENST00000432095 3086 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 LINC01471-201ENST00000461398 3079 ntTSL 5 BASIC12.22□□□□□ -0.45
CLK1P49759 SLC5A11-205ENST00000545376 2294 ntTSL 2 BASIC12.22□□□□□ -0.45
CLK1P49759 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 CA6-205ENST00000480186 1493 ntTSL 2 BASIC12.22□□□□□ -0.45
CLK1P49759 KCNAB2-201ENST00000164247 4273 ntAPPRIS P4 TSL 2 BASIC12.22□□□□□ -0.45
CLK1P49759 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
CLK1P49759 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 MYT1-202ENST00000360149 2061 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 AC005154.3-201ENST00000419639 1393 ntBASIC12.22□□□□□ -0.45
CLK1P49759 CMTR2-202ENST00000434935 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 MRO-203ENST00000428869 1966 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CLK1P49759 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC12.22□□□□□ -0.45
CLK1P49759 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 SERF2-204ENST00000402131 586 ntTSL 2 BASIC12.22□□□□□ -0.45
CLK1P49759 RPL10-203ENST00000406022 748 ntTSL 3 BASIC12.22□□□□□ -0.45
CLK1P49759 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC12.22□□□□□ -0.45
CLK1P49759 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC12.22□□□□□ -0.45
CLK1P49759 LINP1-201ENST00000417112 917 ntTSL 2 BASIC12.22□□□□□ -0.45
CLK1P49759 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC12.22□□□□□ -0.45
CLK1P49759 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC12.22□□□□□ -0.45
CLK1P49759 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CLK1P49759 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC12.22□□□□□ -0.45
CLK1P49759 HNRNPA1P56-201ENST00000505767 954 ntBASIC12.22□□□□□ -0.45
CLK1P49759 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC12.22□□□□□ -0.45
CLK1P49759 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC12.22□□□□□ -0.45
CLK1P49759 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC12.22□□□□□ -0.45
CLK1P49759 COG4-212ENST00000564653 590 ntTSL 5 BASIC12.22□□□□□ -0.45
CLK1P49759 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC12.22□□□□□ -0.45
CLK1P49759 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC12.22□□□□□ -0.45
CLK1P49759 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms