Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGB1Q9Y5G3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20■□□□□ 0.79
PCDHGB1Q9Y5G3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20■□□□□ 0.79
PCDHGB1Q9Y5G3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGB1Q9Y5G3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGB1Q9Y5G3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
PCDHGB1Q9Y5G3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PCDHGB1Q9Y5G3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PCDHGB1Q9Y5G3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGB1Q9Y5G3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
PCDHGB1Q9Y5G3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGB1Q9Y5G3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGB1Q9Y5G3 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHGB1Q9Y5G3 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHGB1Q9Y5G3 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHGB1Q9Y5G3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHGB1Q9Y5G3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGB1Q9Y5G3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGB1Q9Y5G3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGB1Q9Y5G3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGB1Q9Y5G3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGB1Q9Y5G3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHGB1Q9Y5G3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGB1Q9Y5G3 AL353803.4-201ENST00000565882 1934 ntBASIC19.98■□□□□ 0.79
PCDHGB1Q9Y5G3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PCDHGB1Q9Y5G3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHGB1Q9Y5G3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHGB1Q9Y5G3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHGB1Q9Y5G3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGB1Q9Y5G3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PCDHGB1Q9Y5G3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGB1Q9Y5G3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
PCDHGB1Q9Y5G3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PCDHGB1Q9Y5G3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB1Q9Y5G3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB1Q9Y5G3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB1Q9Y5G3 AC244015.2-201ENST00000616358 1861 ntBASIC19.97■□□□□ 0.79
PCDHGB1Q9Y5G3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PCDHGB1Q9Y5G3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB1Q9Y5G3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHGB1Q9Y5G3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB1Q9Y5G3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB1Q9Y5G3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB1Q9Y5G3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB1Q9Y5G3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHGB1Q9Y5G3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB1Q9Y5G3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB1Q9Y5G3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB1Q9Y5G3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB1Q9Y5G3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHGB1Q9Y5G3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHGB1Q9Y5G3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB1Q9Y5G3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PCDHGB1Q9Y5G3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB1Q9Y5G3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
PCDHGB1Q9Y5G3 DUX4L18-201ENST00000553347 1267 ntBASIC19.96■□□□□ 0.79
PCDHGB1Q9Y5G3 AC019171.1-201ENST00000601251 1056 ntBASIC19.96■□□□□ 0.79
PCDHGB1Q9Y5G3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB1Q9Y5G3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHGB1Q9Y5G3 LINC01521-201ENST00000504184 1943 ntBASIC19.96■□□□□ 0.79
PCDHGB1Q9Y5G3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHGB1Q9Y5G3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PCDHGB1Q9Y5G3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGB1Q9Y5G3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGB1Q9Y5G3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PCDHGB1Q9Y5G3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGB1Q9Y5G3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGB1Q9Y5G3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGB1Q9Y5G3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGB1Q9Y5G3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PCDHGB1Q9Y5G3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGB1Q9Y5G3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB1Q9Y5G3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB1Q9Y5G3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
PCDHGB1Q9Y5G3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB1Q9Y5G3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PCDHGB1Q9Y5G3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHGB1Q9Y5G3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB1Q9Y5G3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.94■□□□□ 0.78
PCDHGB1Q9Y5G3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB1Q9Y5G3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHGB1Q9Y5G3 AL035685.1-201ENST00000636663 812 ntBASIC19.94■□□□□ 0.78
PCDHGB1Q9Y5G3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGB1Q9Y5G3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHGB1Q9Y5G3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
PCDHGB1Q9Y5G3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB1Q9Y5G3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB1Q9Y5G3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGB1Q9Y5G3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGB1Q9Y5G3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PCDHGB1Q9Y5G3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGB1Q9Y5G3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGB1Q9Y5G3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGB1Q9Y5G3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGB1Q9Y5G3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PCDHGB1Q9Y5G3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGB1Q9Y5G3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
PCDHGB1Q9Y5G3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.93■□□□□ 0.78
PCDHGB1Q9Y5G3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
PCDHGB1Q9Y5G3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms