Protein–RNA interactions for Protein: Q9Y5F6

PCDHGC5, Protocadherin gamma-C5, humanhuman

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC5Q9Y5F6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.11■■□□□ 1.45
PCDHGC5Q9Y5F6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGC5Q9Y5F6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHGC5Q9Y5F6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.11■■□□□ 1.45
PCDHGC5Q9Y5F6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHGC5Q9Y5F6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGC5Q9Y5F6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGC5Q9Y5F6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGC5Q9Y5F6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGC5Q9Y5F6 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.1■■□□□ 1.45
PCDHGC5Q9Y5F6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDHGC5Q9Y5F6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGC5Q9Y5F6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDHGC5Q9Y5F6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.1■■□□□ 1.45
PCDHGC5Q9Y5F6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHGC5Q9Y5F6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHGC5Q9Y5F6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDHGC5Q9Y5F6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGC5Q9Y5F6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGC5Q9Y5F6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
PCDHGC5Q9Y5F6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHGC5Q9Y5F6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHGC5Q9Y5F6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGC5Q9Y5F6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGC5Q9Y5F6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHGC5Q9Y5F6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
PCDHGC5Q9Y5F6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
PCDHGC5Q9Y5F6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
PCDHGC5Q9Y5F6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.09■■□□□ 1.45
PCDHGC5Q9Y5F6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.09■■□□□ 1.45
PCDHGC5Q9Y5F6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.09■■□□□ 1.45
PCDHGC5Q9Y5F6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.09■■□□□ 1.45
PCDHGC5Q9Y5F6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.08■■□□□ 1.45
PCDHGC5Q9Y5F6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGC5Q9Y5F6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGC5Q9Y5F6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGC5Q9Y5F6 EP400NL-214ENST00000641289 2402 ntBASIC24.08■■□□□ 1.45
PCDHGC5Q9Y5F6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
PCDHGC5Q9Y5F6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
PCDHGC5Q9Y5F6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGC5Q9Y5F6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHGC5Q9Y5F6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGC5Q9Y5F6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGC5Q9Y5F6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGC5Q9Y5F6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.07■■□□□ 1.44
PCDHGC5Q9Y5F6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGC5Q9Y5F6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
PCDHGC5Q9Y5F6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGC5Q9Y5F6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGC5Q9Y5F6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGC5Q9Y5F6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGC5Q9Y5F6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
PCDHGC5Q9Y5F6 AC004911.1-201ENST00000416316 871 ntBASIC24.07■■□□□ 1.44
PCDHGC5Q9Y5F6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
PCDHGC5Q9Y5F6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
PCDHGC5Q9Y5F6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGC5Q9Y5F6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHGC5Q9Y5F6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.06■■□□□ 1.44
PCDHGC5Q9Y5F6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGC5Q9Y5F6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.06■■□□□ 1.44
PCDHGC5Q9Y5F6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
PCDHGC5Q9Y5F6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHGC5Q9Y5F6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.05■■□□□ 1.44
PCDHGC5Q9Y5F6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.05■■□□□ 1.44
PCDHGC5Q9Y5F6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGC5Q9Y5F6 CLDN5-201ENST00000403084 2357 ntBASIC24.05■■□□□ 1.44
PCDHGC5Q9Y5F6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.05■■□□□ 1.44
PCDHGC5Q9Y5F6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGC5Q9Y5F6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.05■■□□□ 1.44
PCDHGC5Q9Y5F6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGC5Q9Y5F6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.05■■□□□ 1.44
PCDHGC5Q9Y5F6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.05■■□□□ 1.44
PCDHGC5Q9Y5F6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.05■■□□□ 1.44
PCDHGC5Q9Y5F6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGC5Q9Y5F6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHGC5Q9Y5F6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.05■■□□□ 1.44
PCDHGC5Q9Y5F6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGC5Q9Y5F6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGC5Q9Y5F6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
PCDHGC5Q9Y5F6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGC5Q9Y5F6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGC5Q9Y5F6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGC5Q9Y5F6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGC5Q9Y5F6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.04■■□□□ 1.44
PCDHGC5Q9Y5F6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.04■■□□□ 1.44
PCDHGC5Q9Y5F6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.04■■□□□ 1.44
PCDHGC5Q9Y5F6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
PCDHGC5Q9Y5F6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGC5Q9Y5F6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHGC5Q9Y5F6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGC5Q9Y5F6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.03■■□□□ 1.44
PCDHGC5Q9Y5F6 ALDH1A3-203ENST00000557963 1670 ntBASIC24.03■■□□□ 1.44
PCDHGC5Q9Y5F6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.03■■□□□ 1.44
PCDHGC5Q9Y5F6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.03■■□□□ 1.44
PCDHGC5Q9Y5F6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.03■■□□□ 1.44
PCDHGC5Q9Y5F6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.03■■□□□ 1.44
PCDHGC5Q9Y5F6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGC5Q9Y5F6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGC5Q9Y5F6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGC5Q9Y5F6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms