Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22■■□□□ 1.11
NCKAP1Q9Y2A7 H19-210ENST00000439725 1929 ntTSL 2 BASIC22■■□□□ 1.11
NCKAP1Q9Y2A7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
NCKAP1Q9Y2A7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
NCKAP1Q9Y2A7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
NCKAP1Q9Y2A7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.99■■□□□ 1.11
NCKAP1Q9Y2A7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NCKAP1Q9Y2A7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NCKAP1Q9Y2A7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NCKAP1Q9Y2A7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
NCKAP1Q9Y2A7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NCKAP1Q9Y2A7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NCKAP1Q9Y2A7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NCKAP1Q9Y2A7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NCKAP1Q9Y2A7 RARRES2P11-201ENST00000635158 484 ntBASIC21.99■■□□□ 1.11
NCKAP1Q9Y2A7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.98■■□□□ 1.11
NCKAP1Q9Y2A7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.98■■□□□ 1.11
NCKAP1Q9Y2A7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
NCKAP1Q9Y2A7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.98■■□□□ 1.11
NCKAP1Q9Y2A7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
NCKAP1Q9Y2A7 BX005040.4-201ENST00000637145 1518 ntBASIC21.98■■□□□ 1.11
NCKAP1Q9Y2A7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
NCKAP1Q9Y2A7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.98■■□□□ 1.11
NCKAP1Q9Y2A7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.98■■□□□ 1.11
NCKAP1Q9Y2A7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
NCKAP1Q9Y2A7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.98■■□□□ 1.11
NCKAP1Q9Y2A7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.98■■□□□ 1.11
NCKAP1Q9Y2A7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.98■■□□□ 1.11
NCKAP1Q9Y2A7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NCKAP1Q9Y2A7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NCKAP1Q9Y2A7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NCKAP1Q9Y2A7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NCKAP1Q9Y2A7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NCKAP1Q9Y2A7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NCKAP1Q9Y2A7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCKAP1Q9Y2A7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCKAP1Q9Y2A7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCKAP1Q9Y2A7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
NCKAP1Q9Y2A7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCKAP1Q9Y2A7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCKAP1Q9Y2A7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.97■■□□□ 1.11
NCKAP1Q9Y2A7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NCKAP1Q9Y2A7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.97■■□□□ 1.11
NCKAP1Q9Y2A7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.97■■□□□ 1.11
NCKAP1Q9Y2A7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.96■■□□□ 1.11
NCKAP1Q9Y2A7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
NCKAP1Q9Y2A7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
NCKAP1Q9Y2A7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCKAP1Q9Y2A7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCKAP1Q9Y2A7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCKAP1Q9Y2A7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCKAP1Q9Y2A7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
NCKAP1Q9Y2A7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NCKAP1Q9Y2A7 AC004911.1-201ENST00000416316 871 ntBASIC21.96■■□□□ 1.11
NCKAP1Q9Y2A7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.96■■□□□ 1.11
NCKAP1Q9Y2A7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NCKAP1Q9Y2A7 AC090192.1-201ENST00000517740 490 ntBASIC21.96■■□□□ 1.11
NCKAP1Q9Y2A7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.96■■□□□ 1.11
NCKAP1Q9Y2A7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.96■■□□□ 1.11
NCKAP1Q9Y2A7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.96■■□□□ 1.11
NCKAP1Q9Y2A7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
NCKAP1Q9Y2A7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NCKAP1Q9Y2A7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.95■■□□□ 1.1
NCKAP1Q9Y2A7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NCKAP1Q9Y2A7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NCKAP1Q9Y2A7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NCKAP1Q9Y2A7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
NCKAP1Q9Y2A7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.95■■□□□ 1.1
NCKAP1Q9Y2A7 OXCT2P1-201ENST00000447263 1535 ntBASIC21.95■■□□□ 1.1
NCKAP1Q9Y2A7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NCKAP1Q9Y2A7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.95■■□□□ 1.1
NCKAP1Q9Y2A7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NCKAP1Q9Y2A7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NCKAP1Q9Y2A7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.94■■□□□ 1.1
NCKAP1Q9Y2A7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.94■■□□□ 1.1
NCKAP1Q9Y2A7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.94■■□□□ 1.1
NCKAP1Q9Y2A7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.94■■□□□ 1.1
NCKAP1Q9Y2A7 AC092437.1-201ENST00000624794 1048 ntBASIC21.94■■□□□ 1.1
NCKAP1Q9Y2A7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.94■■□□□ 1.1
NCKAP1Q9Y2A7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.94■■□□□ 1.1
NCKAP1Q9Y2A7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.94■■□□□ 1.1
NCKAP1Q9Y2A7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCKAP1Q9Y2A7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.94■■□□□ 1.1
NCKAP1Q9Y2A7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
NCKAP1Q9Y2A7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.94■■□□□ 1.1
NCKAP1Q9Y2A7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NCKAP1Q9Y2A7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NCKAP1Q9Y2A7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
NCKAP1Q9Y2A7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NCKAP1Q9Y2A7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
NCKAP1Q9Y2A7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
NCKAP1Q9Y2A7 TPRG1LP1-201ENST00000598702 760 ntBASIC21.93■■□□□ 1.1
NCKAP1Q9Y2A7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.93■■□□□ 1.1
NCKAP1Q9Y2A7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCKAP1Q9Y2A7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCKAP1Q9Y2A7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.92■■□□□ 1.1
NCKAP1Q9Y2A7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCKAP1Q9Y2A7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
NCKAP1Q9Y2A7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCKAP1Q9Y2A7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms