Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC33.02■■■□□ 2.88
SHANK2Q9UPX8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC33.02■■■□□ 2.88
SHANK2Q9UPX8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC33.02■■■□□ 2.88
SHANK2Q9UPX8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC33.02■■■□□ 2.88
SHANK2Q9UPX8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
SHANK2Q9UPX8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC33.02■■■□□ 2.88
SHANK2Q9UPX8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
SHANK2Q9UPX8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC33.01■■■□□ 2.88
SHANK2Q9UPX8 DBI-210ENST00000542275 757 ntTSL 5 BASIC33.01■■■□□ 2.88
SHANK2Q9UPX8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC33.01■■■□□ 2.88
SHANK2Q9UPX8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC33■■■□□ 2.87
SHANK2Q9UPX8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC33■■■□□ 2.87
SHANK2Q9UPX8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC33■■■□□ 2.87
SHANK2Q9UPX8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
SHANK2Q9UPX8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC33■■■□□ 2.87
SHANK2Q9UPX8 AC092068.2-201ENST00000590491 1708 ntBASIC33■■■□□ 2.87
SHANK2Q9UPX8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
SHANK2Q9UPX8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
SHANK2Q9UPX8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC33■■■□□ 2.87
SHANK2Q9UPX8 DUSP8P3-201ENST00000399571 1760 ntBASIC33■■■□□ 2.87
SHANK2Q9UPX8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC32.99■■■□□ 2.87
SHANK2Q9UPX8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
SHANK2Q9UPX8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC32.99■■■□□ 2.87
SHANK2Q9UPX8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC32.99■■■□□ 2.87
SHANK2Q9UPX8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC32.99■■■□□ 2.87
SHANK2Q9UPX8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC32.99■■■□□ 2.87
SHANK2Q9UPX8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC32.99■■■□□ 2.87
SHANK2Q9UPX8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC32.99■■■□□ 2.87
SHANK2Q9UPX8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
SHANK2Q9UPX8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC32.98■■■□□ 2.87
SHANK2Q9UPX8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC32.98■■■□□ 2.87
SHANK2Q9UPX8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
SHANK2Q9UPX8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC32.98■■■□□ 2.87
SHANK2Q9UPX8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC32.98■■■□□ 2.87
SHANK2Q9UPX8 OXCT2P1-201ENST00000447263 1535 ntBASIC32.98■■■□□ 2.87
SHANK2Q9UPX8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
SHANK2Q9UPX8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
SHANK2Q9UPX8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC32.97■■■□□ 2.87
SHANK2Q9UPX8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC32.97■■■□□ 2.87
SHANK2Q9UPX8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC32.97■■■□□ 2.87
SHANK2Q9UPX8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC32.96■■■□□ 2.87
SHANK2Q9UPX8 COX20-201ENST00000366528 568 ntTSL 2 BASIC32.96■■■□□ 2.87
SHANK2Q9UPX8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
SHANK2Q9UPX8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC32.96■■■□□ 2.87
SHANK2Q9UPX8 GAS2L1P2-201ENST00000436355 1356 ntBASIC32.96■■■□□ 2.87
SHANK2Q9UPX8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
SHANK2Q9UPX8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
SHANK2Q9UPX8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC32.96■■■□□ 2.87
SHANK2Q9UPX8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC32.95■■■□□ 2.87
SHANK2Q9UPX8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC32.95■■■□□ 2.87
SHANK2Q9UPX8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC32.95■■■□□ 2.87
SHANK2Q9UPX8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
SHANK2Q9UPX8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
SHANK2Q9UPX8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC32.95■■■□□ 2.86
SHANK2Q9UPX8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC32.94■■■□□ 2.86
SHANK2Q9UPX8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
SHANK2Q9UPX8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC32.94■■■□□ 2.86
SHANK2Q9UPX8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC32.94■■■□□ 2.86
SHANK2Q9UPX8 AC137761.2-201ENST00000561729 223 ntBASIC32.94■■■□□ 2.86
SHANK2Q9UPX8 AC145350.3-201ENST00000569033 163 ntBASIC32.94■■■□□ 2.86
SHANK2Q9UPX8 AC073111.5-205ENST00000641717 521 ntBASIC32.94■■■□□ 2.86
SHANK2Q9UPX8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC32.94■■■□□ 2.86
SHANK2Q9UPX8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
SHANK2Q9UPX8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC32.94■■■□□ 2.86
SHANK2Q9UPX8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC32.93■■■□□ 2.86
SHANK2Q9UPX8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC32.93■■■□□ 2.86
SHANK2Q9UPX8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
SHANK2Q9UPX8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC32.93■■■□□ 2.86
SHANK2Q9UPX8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
SHANK2Q9UPX8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
SHANK2Q9UPX8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
SHANK2Q9UPX8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
SHANK2Q9UPX8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
SHANK2Q9UPX8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
SHANK2Q9UPX8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC32.92■■■□□ 2.86
SHANK2Q9UPX8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC32.92■■■□□ 2.86
SHANK2Q9UPX8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC32.91■■■□□ 2.86
SHANK2Q9UPX8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC32.91■■■□□ 2.86
SHANK2Q9UPX8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
SHANK2Q9UPX8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC32.91■■■□□ 2.86
SHANK2Q9UPX8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC32.91■■■□□ 2.86
SHANK2Q9UPX8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
SHANK2Q9UPX8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
SHANK2Q9UPX8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC32.9■■■□□ 2.86
SHANK2Q9UPX8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC32.89■■■□□ 2.86
SHANK2Q9UPX8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC32.89■■■□□ 2.86
SHANK2Q9UPX8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC32.89■■■□□ 2.86
SHANK2Q9UPX8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC32.89■■■□□ 2.86
SHANK2Q9UPX8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC32.89■■■□□ 2.86
SHANK2Q9UPX8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC32.89■■■□□ 2.86
SHANK2Q9UPX8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
SHANK2Q9UPX8 AC016769.1-201ENST00000409132 1010 ntBASIC32.88■■■□□ 2.85
SHANK2Q9UPX8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC32.88■■■□□ 2.85
SHANK2Q9UPX8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC32.88■■■□□ 2.85
SHANK2Q9UPX8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC32.88■■■□□ 2.85
SHANK2Q9UPX8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
SHANK2Q9UPX8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC32.88■■■□□ 2.85
SHANK2Q9UPX8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC32.87■■■□□ 2.85
SHANK2Q9UPX8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC32.87■■■□□ 2.85
SHANK2Q9UPX8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC32.87■■■□□ 2.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms