Protein–RNA interactions for Protein: Q9UPE1

SRPK3, SRSF protein kinase 3, humanhuman

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK3Q9UPE1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRPK3Q9UPE1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
SRPK3Q9UPE1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRPK3Q9UPE1 OXCT2P1-201ENST00000447263 1535 ntBASIC20.73■□□□□ 0.91
SRPK3Q9UPE1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRPK3Q9UPE1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SRPK3Q9UPE1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SRPK3Q9UPE1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.73■□□□□ 0.91
SRPK3Q9UPE1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.73■□□□□ 0.91
SRPK3Q9UPE1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.73■□□□□ 0.91
SRPK3Q9UPE1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRPK3Q9UPE1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRPK3Q9UPE1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRPK3Q9UPE1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRPK3Q9UPE1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRPK3Q9UPE1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SRPK3Q9UPE1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRPK3Q9UPE1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.72■□□□□ 0.91
SRPK3Q9UPE1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRPK3Q9UPE1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.72■□□□□ 0.91
SRPK3Q9UPE1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.72■□□□□ 0.91
SRPK3Q9UPE1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SRPK3Q9UPE1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRPK3Q9UPE1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.72■□□□□ 0.91
SRPK3Q9UPE1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRPK3Q9UPE1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRPK3Q9UPE1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRPK3Q9UPE1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SRPK3Q9UPE1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.71■□□□□ 0.91
SRPK3Q9UPE1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SRPK3Q9UPE1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.71■□□□□ 0.91
SRPK3Q9UPE1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRPK3Q9UPE1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRPK3Q9UPE1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRPK3Q9UPE1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SRPK3Q9UPE1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.71■□□□□ 0.91
SRPK3Q9UPE1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.71■□□□□ 0.91
SRPK3Q9UPE1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.71■□□□□ 0.91
SRPK3Q9UPE1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRPK3Q9UPE1 ESRRAP2-201ENST00000418437 1549 ntBASIC20.71■□□□□ 0.91
SRPK3Q9UPE1 DUSP8P3-201ENST00000399571 1760 ntBASIC20.71■□□□□ 0.91
SRPK3Q9UPE1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRPK3Q9UPE1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRPK3Q9UPE1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRPK3Q9UPE1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SRPK3Q9UPE1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRPK3Q9UPE1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRPK3Q9UPE1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SRPK3Q9UPE1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRPK3Q9UPE1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.7■□□□□ 0.9
SRPK3Q9UPE1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRPK3Q9UPE1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
SRPK3Q9UPE1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.7■□□□□ 0.9
SRPK3Q9UPE1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SRPK3Q9UPE1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRPK3Q9UPE1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.7■□□□□ 0.9
SRPK3Q9UPE1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRPK3Q9UPE1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SRPK3Q9UPE1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRPK3Q9UPE1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
SRPK3Q9UPE1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SRPK3Q9UPE1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
SRPK3Q9UPE1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SRPK3Q9UPE1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SRPK3Q9UPE1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.69■□□□□ 0.9
SRPK3Q9UPE1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRPK3Q9UPE1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.69■□□□□ 0.9
SRPK3Q9UPE1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.69■□□□□ 0.9
SRPK3Q9UPE1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.69■□□□□ 0.9
SRPK3Q9UPE1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.69■□□□□ 0.9
SRPK3Q9UPE1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.69■□□□□ 0.9
SRPK3Q9UPE1 CCDC92B-201ENST00000575506 885 ntBASIC20.69■□□□□ 0.9
SRPK3Q9UPE1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.69■□□□□ 0.9
SRPK3Q9UPE1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRPK3Q9UPE1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
SRPK3Q9UPE1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRPK3Q9UPE1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SRPK3Q9UPE1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.68■□□□□ 0.9
SRPK3Q9UPE1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRPK3Q9UPE1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRPK3Q9UPE1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRPK3Q9UPE1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
SRPK3Q9UPE1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRPK3Q9UPE1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SRPK3Q9UPE1 TERF1P2-201ENST00000583350 1212 ntBASIC20.68■□□□□ 0.9
SRPK3Q9UPE1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRPK3Q9UPE1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SRPK3Q9UPE1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRPK3Q9UPE1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.67■□□□□ 0.9
SRPK3Q9UPE1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SRPK3Q9UPE1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRPK3Q9UPE1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.67■□□□□ 0.9
SRPK3Q9UPE1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.67■□□□□ 0.9
SRPK3Q9UPE1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
SRPK3Q9UPE1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRPK3Q9UPE1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRPK3Q9UPE1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SRPK3Q9UPE1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRPK3Q9UPE1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SRPK3Q9UPE1 DUX4L2-201ENST00000561772 1275 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms