Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIMS3Q9UJD0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIMS3Q9UJD0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIMS3Q9UJD0 TSPY13P-201ENST00000338964 914 ntBASIC20.73■□□□□ 0.91
RIMS3Q9UJD0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.73■□□□□ 0.91
RIMS3Q9UJD0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.73■□□□□ 0.91
RIMS3Q9UJD0 MIR4281-201ENST00000580852 62 ntBASIC20.73■□□□□ 0.91
RIMS3Q9UJD0 AC010980.1-201ENST00000587192 1142 ntBASIC20.73■□□□□ 0.91
RIMS3Q9UJD0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RIMS3Q9UJD0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIMS3Q9UJD0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RIMS3Q9UJD0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIMS3Q9UJD0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RIMS3Q9UJD0 AL157384.1-201ENST00000445995 2473 ntBASIC20.72■□□□□ 0.91
RIMS3Q9UJD0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.72■□□□□ 0.91
RIMS3Q9UJD0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.72■□□□□ 0.91
RIMS3Q9UJD0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIMS3Q9UJD0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RIMS3Q9UJD0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RIMS3Q9UJD0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIMS3Q9UJD0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
RIMS3Q9UJD0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.72■□□□□ 0.91
RIMS3Q9UJD0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
RIMS3Q9UJD0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIMS3Q9UJD0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RIMS3Q9UJD0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RIMS3Q9UJD0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.71■□□□□ 0.91
RIMS3Q9UJD0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.71■□□□□ 0.91
RIMS3Q9UJD0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.71■□□□□ 0.91
RIMS3Q9UJD0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RIMS3Q9UJD0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
RIMS3Q9UJD0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.7■□□□□ 0.91
RIMS3Q9UJD0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.7■□□□□ 0.9
RIMS3Q9UJD0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.7■□□□□ 0.9
RIMS3Q9UJD0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIMS3Q9UJD0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIMS3Q9UJD0 AC244015.2-201ENST00000616358 1861 ntBASIC20.7■□□□□ 0.9
RIMS3Q9UJD0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.7■□□□□ 0.9
RIMS3Q9UJD0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIMS3Q9UJD0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RIMS3Q9UJD0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIMS3Q9UJD0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIMS3Q9UJD0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RIMS3Q9UJD0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RIMS3Q9UJD0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIMS3Q9UJD0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIMS3Q9UJD0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RIMS3Q9UJD0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIMS3Q9UJD0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RIMS3Q9UJD0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RIMS3Q9UJD0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.69■□□□□ 0.9
RIMS3Q9UJD0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RIMS3Q9UJD0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIMS3Q9UJD0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIMS3Q9UJD0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
RIMS3Q9UJD0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIMS3Q9UJD0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIMS3Q9UJD0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.68■□□□□ 0.9
RIMS3Q9UJD0 AC004448.1-201ENST00000458332 883 ntBASIC20.68■□□□□ 0.9
RIMS3Q9UJD0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.68■□□□□ 0.9
RIMS3Q9UJD0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.68■□□□□ 0.9
RIMS3Q9UJD0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.68■□□□□ 0.9
RIMS3Q9UJD0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RIMS3Q9UJD0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.68■□□□□ 0.9
RIMS3Q9UJD0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.68■□□□□ 0.9
RIMS3Q9UJD0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RIMS3Q9UJD0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIMS3Q9UJD0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RIMS3Q9UJD0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RIMS3Q9UJD0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.68■□□□□ 0.9
RIMS3Q9UJD0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIMS3Q9UJD0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIMS3Q9UJD0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
RIMS3Q9UJD0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
RIMS3Q9UJD0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIMS3Q9UJD0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIMS3Q9UJD0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIMS3Q9UJD0 LINC01521-201ENST00000504184 1943 ntBASIC20.67■□□□□ 0.9
RIMS3Q9UJD0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIMS3Q9UJD0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.67■□□□□ 0.9
RIMS3Q9UJD0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.67■□□□□ 0.9
RIMS3Q9UJD0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.67■□□□□ 0.9
RIMS3Q9UJD0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.67■□□□□ 0.9
RIMS3Q9UJD0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIMS3Q9UJD0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIMS3Q9UJD0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIMS3Q9UJD0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.67■□□□□ 0.9
RIMS3Q9UJD0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.67■□□□□ 0.9
RIMS3Q9UJD0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.66■□□□□ 0.9
RIMS3Q9UJD0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIMS3Q9UJD0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RIMS3Q9UJD0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RIMS3Q9UJD0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIMS3Q9UJD0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIMS3Q9UJD0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.66■□□□□ 0.9
RIMS3Q9UJD0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.66■□□□□ 0.9
RIMS3Q9UJD0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIMS3Q9UJD0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RIMS3Q9UJD0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RIMS3Q9UJD0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms