Protein–RNA interactions for Protein: Q9NVP1

DDX18, ATP-dependent RNA helicase DDX18, humanhuman

Known RBP Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX18Q9NVP1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX18Q9NVP1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX18Q9NVP1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
DDX18Q9NVP1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDX18Q9NVP1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.03■□□□□ 0.96
DDX18Q9NVP1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.03■□□□□ 0.96
DDX18Q9NVP1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX18Q9NVP1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX18Q9NVP1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
DDX18Q9NVP1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.03■□□□□ 0.96
DDX18Q9NVP1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX18Q9NVP1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX18Q9NVP1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.03■□□□□ 0.96
DDX18Q9NVP1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX18Q9NVP1 AC092667.1-201ENST00000434301 2586 ntBASIC21.03■□□□□ 0.96
DDX18Q9NVP1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX18Q9NVP1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX18Q9NVP1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX18Q9NVP1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
DDX18Q9NVP1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX18Q9NVP1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX18Q9NVP1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.02■□□□□ 0.96
DDX18Q9NVP1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.02■□□□□ 0.96
DDX18Q9NVP1 UNC93B8-201ENST00000511903 705 ntBASIC21.02■□□□□ 0.96
DDX18Q9NVP1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.02■□□□□ 0.96
DDX18Q9NVP1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX18Q9NVP1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX18Q9NVP1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.02■□□□□ 0.96
DDX18Q9NVP1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
DDX18Q9NVP1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
DDX18Q9NVP1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.01■□□□□ 0.95
DDX18Q9NVP1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
DDX18Q9NVP1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.01■□□□□ 0.95
DDX18Q9NVP1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX18Q9NVP1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.01■□□□□ 0.95
DDX18Q9NVP1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.01■□□□□ 0.95
DDX18Q9NVP1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.01■□□□□ 0.95
DDX18Q9NVP1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
DDX18Q9NVP1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.01■□□□□ 0.95
DDX18Q9NVP1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX18Q9NVP1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX18Q9NVP1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX18Q9NVP1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
DDX18Q9NVP1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
DDX18Q9NVP1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
DDX18Q9NVP1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21■□□□□ 0.95
DDX18Q9NVP1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21■□□□□ 0.95
DDX18Q9NVP1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX18Q9NVP1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX18Q9NVP1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21■□□□□ 0.95
DDX18Q9NVP1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX18Q9NVP1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX18Q9NVP1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX18Q9NVP1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
DDX18Q9NVP1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX18Q9NVP1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX18Q9NVP1 KRT16P3-201ENST00000439127 1283 ntBASIC20.99■□□□□ 0.95
DDX18Q9NVP1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
DDX18Q9NVP1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX18Q9NVP1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.99■□□□□ 0.95
DDX18Q9NVP1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DDX18Q9NVP1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.98■□□□□ 0.95
DDX18Q9NVP1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX18Q9NVP1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
DDX18Q9NVP1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
DDX18Q9NVP1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX18Q9NVP1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX18Q9NVP1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.98■□□□□ 0.95
DDX18Q9NVP1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX18Q9NVP1 GUSBP5-201ENST00000418136 578 ntBASIC20.98■□□□□ 0.95
DDX18Q9NVP1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
DDX18Q9NVP1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DDX18Q9NVP1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX18Q9NVP1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.98■□□□□ 0.95
DDX18Q9NVP1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DDX18Q9NVP1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.97■□□□□ 0.95
DDX18Q9NVP1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DDX18Q9NVP1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.97■□□□□ 0.95
DDX18Q9NVP1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
DDX18Q9NVP1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DDX18Q9NVP1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
DDX18Q9NVP1 MIR6724-1-201ENST00000616420 92 ntBASIC20.97■□□□□ 0.95
DDX18Q9NVP1 MIR6724-2-201ENST00000616483 92 ntBASIC20.97■□□□□ 0.95
DDX18Q9NVP1 MIR6724-4-201ENST00000617390 92 ntBASIC20.97■□□□□ 0.95
DDX18Q9NVP1 MIR6724-3-201ENST00000622482 92 ntBASIC20.97■□□□□ 0.95
DDX18Q9NVP1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX18Q9NVP1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDX18Q9NVP1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX18Q9NVP1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX18Q9NVP1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX18Q9NVP1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.96■□□□□ 0.95
DDX18Q9NVP1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
DDX18Q9NVP1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.96■□□□□ 0.95
DDX18Q9NVP1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
DDX18Q9NVP1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDX18Q9NVP1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.96■□□□□ 0.95
DDX18Q9NVP1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
DDX18Q9NVP1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX18Q9NVP1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
DDX18Q9NVP1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms