Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.71■□□□□ 0.91
PRDM9Q9NQV7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PRDM9Q9NQV7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRDM9Q9NQV7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRDM9Q9NQV7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.71■□□□□ 0.91
PRDM9Q9NQV7 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.71■□□□□ 0.91
PRDM9Q9NQV7 CA15P2-201ENST00000611168 834 ntBASIC20.71■□□□□ 0.91
PRDM9Q9NQV7 AL031602.1-201ENST00000633169 911 ntBASIC20.71■□□□□ 0.91
PRDM9Q9NQV7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PRDM9Q9NQV7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRDM9Q9NQV7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRDM9Q9NQV7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PRDM9Q9NQV7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.71■□□□□ 0.91
PRDM9Q9NQV7 LINC01960-201ENST00000563759 1884 ntBASIC20.71■□□□□ 0.91
PRDM9Q9NQV7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRDM9Q9NQV7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
PRDM9Q9NQV7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PRDM9Q9NQV7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRDM9Q9NQV7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRDM9Q9NQV7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRDM9Q9NQV7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRDM9Q9NQV7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PRDM9Q9NQV7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.7■□□□□ 0.9
PRDM9Q9NQV7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.7■□□□□ 0.9
PRDM9Q9NQV7 AC010525.1-201ENST00000585559 441 ntBASIC20.7■□□□□ 0.9
PRDM9Q9NQV7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRDM9Q9NQV7 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.7■□□□□ 0.9
PRDM9Q9NQV7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PRDM9Q9NQV7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRDM9Q9NQV7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRDM9Q9NQV7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRDM9Q9NQV7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRDM9Q9NQV7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
PRDM9Q9NQV7 AC087742.1-201ENST00000575880 1738 ntBASIC20.7■□□□□ 0.9
PRDM9Q9NQV7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM9Q9NQV7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM9Q9NQV7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRDM9Q9NQV7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.69■□□□□ 0.9
PRDM9Q9NQV7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PRDM9Q9NQV7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.68■□□□□ 0.9
PRDM9Q9NQV7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRDM9Q9NQV7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.68■□□□□ 0.9
PRDM9Q9NQV7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.68■□□□□ 0.9
PRDM9Q9NQV7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.68■□□□□ 0.9
PRDM9Q9NQV7 AC126544.1-201ENST00000580842 1059 ntBASIC20.68■□□□□ 0.9
PRDM9Q9NQV7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.67■□□□□ 0.9
PRDM9Q9NQV7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PRDM9Q9NQV7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM9Q9NQV7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.67■□□□□ 0.9
PRDM9Q9NQV7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM9Q9NQV7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM9Q9NQV7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PRDM9Q9NQV7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.67■□□□□ 0.9
PRDM9Q9NQV7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRDM9Q9NQV7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
PRDM9Q9NQV7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.67■□□□□ 0.9
PRDM9Q9NQV7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.67■□□□□ 0.9
PRDM9Q9NQV7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PRDM9Q9NQV7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
PRDM9Q9NQV7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRDM9Q9NQV7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
PRDM9Q9NQV7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.66■□□□□ 0.9
PRDM9Q9NQV7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRDM9Q9NQV7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRDM9Q9NQV7 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.66■□□□□ 0.9
PRDM9Q9NQV7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.66■□□□□ 0.9
PRDM9Q9NQV7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.66■□□□□ 0.9
PRDM9Q9NQV7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.66■□□□□ 0.9
PRDM9Q9NQV7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PRDM9Q9NQV7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.66■□□□□ 0.9
PRDM9Q9NQV7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PRDM9Q9NQV7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRDM9Q9NQV7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRDM9Q9NQV7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRDM9Q9NQV7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.66■□□□□ 0.9
PRDM9Q9NQV7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRDM9Q9NQV7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRDM9Q9NQV7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRDM9Q9NQV7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.65■□□□□ 0.9
PRDM9Q9NQV7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PRDM9Q9NQV7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM9Q9NQV7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM9Q9NQV7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.65■□□□□ 0.9
PRDM9Q9NQV7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PRDM9Q9NQV7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PRDM9Q9NQV7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PRDM9Q9NQV7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.9
PRDM9Q9NQV7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
PRDM9Q9NQV7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.64■□□□□ 0.89
PRDM9Q9NQV7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM9Q9NQV7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM9Q9NQV7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PRDM9Q9NQV7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
PRDM9Q9NQV7 AP005435.1-201ENST00000529293 1178 ntBASIC20.64■□□□□ 0.89
PRDM9Q9NQV7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM9Q9NQV7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM9Q9NQV7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM9Q9NQV7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM9Q9NQV7 AC233723.2-201ENST00000623798 2106 ntBASIC20.63■□□□□ 0.89
PRDM9Q9NQV7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms