Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HMG20AQ9NP66 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20AQ9NP66 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.8■□□□□ 0.76
HMG20AQ9NP66 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20AQ9NP66 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20AQ9NP66 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20AQ9NP66 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20AQ9NP66 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20AQ9NP66 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.8■□□□□ 0.76
HMG20AQ9NP66 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HMG20AQ9NP66 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20AQ9NP66 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HMG20AQ9NP66 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.79■□□□□ 0.76
HMG20AQ9NP66 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.79■□□□□ 0.76
HMG20AQ9NP66 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMG20AQ9NP66 AL391422.3-201ENST00000603791 2761 ntBASIC19.79■□□□□ 0.76
HMG20AQ9NP66 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMG20AQ9NP66 AC080038.3-201ENST00000623346 1952 ntBASIC19.79■□□□□ 0.76
HMG20AQ9NP66 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMG20AQ9NP66 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.79■□□□□ 0.76
HMG20AQ9NP66 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMG20AQ9NP66 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMG20AQ9NP66 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.78■□□□□ 0.76
HMG20AQ9NP66 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.78■□□□□ 0.76
HMG20AQ9NP66 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HMG20AQ9NP66 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HMG20AQ9NP66 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMG20AQ9NP66 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HMG20AQ9NP66 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.78■□□□□ 0.76
HMG20AQ9NP66 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMG20AQ9NP66 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HMG20AQ9NP66 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.78■□□□□ 0.76
HMG20AQ9NP66 MIR6765-201ENST00000614092 87 ntBASIC19.78■□□□□ 0.76
HMG20AQ9NP66 U85056.1-201ENST00000616429 682 ntBASIC19.78■□□□□ 0.76
HMG20AQ9NP66 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.78■□□□□ 0.76
HMG20AQ9NP66 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMG20AQ9NP66 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HMG20AQ9NP66 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMG20AQ9NP66 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMG20AQ9NP66 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
HMG20AQ9NP66 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
HMG20AQ9NP66 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMG20AQ9NP66 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
HMG20AQ9NP66 AL161729.1-201ENST00000604104 1402 ntBASIC19.77■□□□□ 0.76
HMG20AQ9NP66 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.77■□□□□ 0.76
HMG20AQ9NP66 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
HMG20AQ9NP66 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HMG20AQ9NP66 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMG20AQ9NP66 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.77■□□□□ 0.76
HMG20AQ9NP66 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.77■□□□□ 0.76
HMG20AQ9NP66 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
HMG20AQ9NP66 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HMG20AQ9NP66 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.77■□□□□ 0.75
HMG20AQ9NP66 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
HMG20AQ9NP66 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
HMG20AQ9NP66 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HMG20AQ9NP66 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMG20AQ9NP66 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HMG20AQ9NP66 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMG20AQ9NP66 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HMG20AQ9NP66 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HMG20AQ9NP66 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMG20AQ9NP66 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMG20AQ9NP66 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.76■□□□□ 0.75
HMG20AQ9NP66 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMG20AQ9NP66 DUX4L9-201ENST00000449051 1259 ntBASIC19.76■□□□□ 0.75
HMG20AQ9NP66 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.76■□□□□ 0.75
HMG20AQ9NP66 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMG20AQ9NP66 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.76■□□□□ 0.75
HMG20AQ9NP66 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMG20AQ9NP66 AL157384.1-201ENST00000445995 2473 ntBASIC19.76■□□□□ 0.75
HMG20AQ9NP66 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMG20AQ9NP66 AC079630.1-202ENST00000618127 1840 ntBASIC19.75■□□□□ 0.75
HMG20AQ9NP66 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HMG20AQ9NP66 AC087393.1-201ENST00000582896 145 ntBASIC19.75■□□□□ 0.75
HMG20AQ9NP66 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.75■□□□□ 0.75
HMG20AQ9NP66 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HMG20AQ9NP66 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HMG20AQ9NP66 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMG20AQ9NP66 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HMG20AQ9NP66 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HMG20AQ9NP66 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
HMG20AQ9NP66 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMG20AQ9NP66 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
HMG20AQ9NP66 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMG20AQ9NP66 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HMG20AQ9NP66 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HMG20AQ9NP66 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
HMG20AQ9NP66 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMG20AQ9NP66 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.74■□□□□ 0.75
HMG20AQ9NP66 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
HMG20AQ9NP66 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMG20AQ9NP66 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HMG20AQ9NP66 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMG20AQ9NP66 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
HMG20AQ9NP66 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.73■□□□□ 0.75
HMG20AQ9NP66 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.73■□□□□ 0.75
HMG20AQ9NP66 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
HMG20AQ9NP66 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HMG20AQ9NP66 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms