Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHD8Q9HCK8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.79■□□□□ 0.92
CHD8Q9HCK8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHD8Q9HCK8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHD8Q9HCK8 AC026366.1-201ENST00000488803 879 ntBASIC20.79■□□□□ 0.92
CHD8Q9HCK8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.79■□□□□ 0.92
CHD8Q9HCK8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHD8Q9HCK8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.78■□□□□ 0.92
CHD8Q9HCK8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CHD8Q9HCK8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHD8Q9HCK8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CHD8Q9HCK8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.78■□□□□ 0.92
CHD8Q9HCK8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CHD8Q9HCK8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CHD8Q9HCK8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.78■□□□□ 0.92
CHD8Q9HCK8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.78■□□□□ 0.92
CHD8Q9HCK8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.78■□□□□ 0.92
CHD8Q9HCK8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD8Q9HCK8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD8Q9HCK8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.77■□□□□ 0.92
CHD8Q9HCK8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHD8Q9HCK8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHD8Q9HCK8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CHD8Q9HCK8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHD8Q9HCK8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.77■□□□□ 0.91
CHD8Q9HCK8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.77■□□□□ 0.91
CHD8Q9HCK8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.77■□□□□ 0.91
CHD8Q9HCK8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD8Q9HCK8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD8Q9HCK8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.76■□□□□ 0.91
CHD8Q9HCK8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.76■□□□□ 0.91
CHD8Q9HCK8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD8Q9HCK8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHD8Q9HCK8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD8Q9HCK8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD8Q9HCK8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD8Q9HCK8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.76■□□□□ 0.91
CHD8Q9HCK8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CHD8Q9HCK8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHD8Q9HCK8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.75■□□□□ 0.91
CHD8Q9HCK8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.75■□□□□ 0.91
CHD8Q9HCK8 BX088651.1-201ENST00000540551 451 ntBASIC20.75■□□□□ 0.91
CHD8Q9HCK8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHD8Q9HCK8 AC010536.3-201ENST00000620306 533 ntBASIC20.75■□□□□ 0.91
CHD8Q9HCK8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHD8Q9HCK8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD8Q9HCK8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.75■□□□□ 0.91
CHD8Q9HCK8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD8Q9HCK8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD8Q9HCK8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CHD8Q9HCK8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHD8Q9HCK8 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD8Q9HCK8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CHD8Q9HCK8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.74■□□□□ 0.91
CHD8Q9HCK8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD8Q9HCK8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.74■□□□□ 0.91
CHD8Q9HCK8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.74■□□□□ 0.91
CHD8Q9HCK8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CHD8Q9HCK8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD8Q9HCK8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD8Q9HCK8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD8Q9HCK8 UBE2SP1-201ENST00000450587 669 ntBASIC20.73■□□□□ 0.91
CHD8Q9HCK8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.73■□□□□ 0.91
CHD8Q9HCK8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.73■□□□□ 0.91
CHD8Q9HCK8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD8Q9HCK8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD8Q9HCK8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CHD8Q9HCK8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.73■□□□□ 0.91
CHD8Q9HCK8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.73■□□□□ 0.91
CHD8Q9HCK8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD8Q9HCK8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.73■□□□□ 0.91
CHD8Q9HCK8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CHD8Q9HCK8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.72■□□□□ 0.91
CHD8Q9HCK8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD8Q9HCK8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHD8Q9HCK8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.72■□□□□ 0.91
CHD8Q9HCK8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD8Q9HCK8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.72■□□□□ 0.91
CHD8Q9HCK8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHD8Q9HCK8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.72■□□□□ 0.91
CHD8Q9HCK8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHD8Q9HCK8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD8Q9HCK8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD8Q9HCK8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CHD8Q9HCK8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CHD8Q9HCK8 RCN1P1-201ENST00000400413 996 ntBASIC20.72■□□□□ 0.91
CHD8Q9HCK8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.72■□□□□ 0.91
CHD8Q9HCK8 Z99916.2-201ENST00000604037 246 ntBASIC20.72■□□□□ 0.91
CHD8Q9HCK8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.72■□□□□ 0.91
CHD8Q9HCK8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHD8Q9HCK8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD8Q9HCK8 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.71■□□□□ 0.91
CHD8Q9HCK8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHD8Q9HCK8 AC013268.1-206ENST00000638368 961 ntBASIC20.71■□□□□ 0.91
CHD8Q9HCK8 AC112229.1-201ENST00000639295 961 ntBASIC20.71■□□□□ 0.91
CHD8Q9HCK8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.71■□□□□ 0.91
CHD8Q9HCK8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD8Q9HCK8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD8Q9HCK8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHD8Q9HCK8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms