Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
MRM3Q9HC36 LINC00565-201ENST00000562710 2331 ntBASIC21.97■■□□□ 1.11
MRM3Q9HC36 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
MRM3Q9HC36 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.97■■□□□ 1.11
MRM3Q9HC36 C11orf96-202ENST00000528572 1834 ntBASIC21.96■■□□□ 1.11
MRM3Q9HC36 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MRM3Q9HC36 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MRM3Q9HC36 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MRM3Q9HC36 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MRM3Q9HC36 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MRM3Q9HC36 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MRM3Q9HC36 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.96■■□□□ 1.11
MRM3Q9HC36 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.96■■□□□ 1.11
MRM3Q9HC36 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.96■■□□□ 1.11
MRM3Q9HC36 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.96■■□□□ 1.11
MRM3Q9HC36 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MRM3Q9HC36 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.96■■□□□ 1.11
MRM3Q9HC36 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.96■■□□□ 1.11
MRM3Q9HC36 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MRM3Q9HC36 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
MRM3Q9HC36 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.96■■□□□ 1.11
MRM3Q9HC36 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
MRM3Q9HC36 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MRM3Q9HC36 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MRM3Q9HC36 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
MRM3Q9HC36 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.11
MRM3Q9HC36 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.95■■□□□ 1.11
MRM3Q9HC36 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.95■■□□□ 1.1
MRM3Q9HC36 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
MRM3Q9HC36 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
MRM3Q9HC36 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.95■■□□□ 1.1
MRM3Q9HC36 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.95■■□□□ 1.1
MRM3Q9HC36 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.95■■□□□ 1.1
MRM3Q9HC36 MIR3181-201ENST00000578512 73 ntBASIC21.95■■□□□ 1.1
MRM3Q9HC36 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.95■■□□□ 1.1
MRM3Q9HC36 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MRM3Q9HC36 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MRM3Q9HC36 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MRM3Q9HC36 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.95■■□□□ 1.1
MRM3Q9HC36 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
MRM3Q9HC36 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
MRM3Q9HC36 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
MRM3Q9HC36 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MRM3Q9HC36 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
MRM3Q9HC36 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MRM3Q9HC36 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
MRM3Q9HC36 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
MRM3Q9HC36 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.94■■□□□ 1.1
MRM3Q9HC36 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MRM3Q9HC36 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
MRM3Q9HC36 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
MRM3Q9HC36 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
MRM3Q9HC36 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.94■■□□□ 1.1
MRM3Q9HC36 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
MRM3Q9HC36 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MRM3Q9HC36 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MRM3Q9HC36 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MRM3Q9HC36 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MRM3Q9HC36 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
MRM3Q9HC36 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MRM3Q9HC36 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
MRM3Q9HC36 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.93■■□□□ 1.1
MRM3Q9HC36 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
MRM3Q9HC36 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
MRM3Q9HC36 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.93■■□□□ 1.1
MRM3Q9HC36 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
MRM3Q9HC36 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.93■■□□□ 1.1
MRM3Q9HC36 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.93■■□□□ 1.1
MRM3Q9HC36 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
MRM3Q9HC36 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
MRM3Q9HC36 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MRM3Q9HC36 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.92■■□□□ 1.1
MRM3Q9HC36 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MRM3Q9HC36 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
MRM3Q9HC36 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
MRM3Q9HC36 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.92■■□□□ 1.1
MRM3Q9HC36 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MRM3Q9HC36 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
MRM3Q9HC36 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MRM3Q9HC36 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MRM3Q9HC36 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MRM3Q9HC36 OR2I1P-207ENST00000453522 948 ntBASIC21.92■■□□□ 1.1
MRM3Q9HC36 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.92■■□□□ 1.1
MRM3Q9HC36 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.92■■□□□ 1.1
MRM3Q9HC36 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
MRM3Q9HC36 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
MRM3Q9HC36 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
MRM3Q9HC36 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.92■■□□□ 1.1
MRM3Q9HC36 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.92■■□□□ 1.1
MRM3Q9HC36 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MRM3Q9HC36 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MRM3Q9HC36 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
MRM3Q9HC36 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
MRM3Q9HC36 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.91■■□□□ 1.1
MRM3Q9HC36 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MRM3Q9HC36 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.91■■□□□ 1.1
MRM3Q9HC36 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MRM3Q9HC36 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
MRM3Q9HC36 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MRM3Q9HC36 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms