Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.55■□□□□ 0.72
SEC61A2Q9H9S3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEC61A2Q9H9S3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SEC61A2Q9H9S3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.55■□□□□ 0.72
SEC61A2Q9H9S3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEC61A2Q9H9S3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SEC61A2Q9H9S3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
SEC61A2Q9H9S3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SEC61A2Q9H9S3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SEC61A2Q9H9S3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.55■□□□□ 0.72
SEC61A2Q9H9S3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEC61A2Q9H9S3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SEC61A2Q9H9S3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEC61A2Q9H9S3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEC61A2Q9H9S3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SEC61A2Q9H9S3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEC61A2Q9H9S3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEC61A2Q9H9S3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEC61A2Q9H9S3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.54■□□□□ 0.72
SEC61A2Q9H9S3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.54■□□□□ 0.72
SEC61A2Q9H9S3 AC006455.2-201ENST00000429931 906 ntBASIC19.54■□□□□ 0.72
SEC61A2Q9H9S3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.54■□□□□ 0.72
SEC61A2Q9H9S3 AC099791.2-201ENST00000605725 427 ntBASIC19.54■□□□□ 0.72
SEC61A2Q9H9S3 AC110285.6-201ENST00000617652 491 ntBASIC19.54■□□□□ 0.72
SEC61A2Q9H9S3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.54■□□□□ 0.72
SEC61A2Q9H9S3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SEC61A2Q9H9S3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEC61A2Q9H9S3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.54■□□□□ 0.72
SEC61A2Q9H9S3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEC61A2Q9H9S3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.54■□□□□ 0.72
SEC61A2Q9H9S3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEC61A2Q9H9S3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEC61A2Q9H9S3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.54■□□□□ 0.72
SEC61A2Q9H9S3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEC61A2Q9H9S3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEC61A2Q9H9S3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.53■□□□□ 0.72
SEC61A2Q9H9S3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SEC61A2Q9H9S3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEC61A2Q9H9S3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEC61A2Q9H9S3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.53■□□□□ 0.72
SEC61A2Q9H9S3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SEC61A2Q9H9S3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.53■□□□□ 0.72
SEC61A2Q9H9S3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SEC61A2Q9H9S3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SEC61A2Q9H9S3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEC61A2Q9H9S3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEC61A2Q9H9S3 AC004687.1-201ENST00000579003 1625 ntBASIC19.53■□□□□ 0.72
SEC61A2Q9H9S3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SEC61A2Q9H9S3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SEC61A2Q9H9S3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEC61A2Q9H9S3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SEC61A2Q9H9S3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SEC61A2Q9H9S3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SEC61A2Q9H9S3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SEC61A2Q9H9S3 ESRRAP2-201ENST00000418437 1549 ntBASIC19.52■□□□□ 0.72
SEC61A2Q9H9S3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SEC61A2Q9H9S3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SEC61A2Q9H9S3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SEC61A2Q9H9S3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.52■□□□□ 0.72
SEC61A2Q9H9S3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SEC61A2Q9H9S3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SEC61A2Q9H9S3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.52■□□□□ 0.72
SEC61A2Q9H9S3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.52■□□□□ 0.72
SEC61A2Q9H9S3 AC241377.3-202ENST00000626088 1088 ntBASIC19.52■□□□□ 0.72
SEC61A2Q9H9S3 AC241585.3-202ENST00000628937 1088 ntBASIC19.52■□□□□ 0.72
SEC61A2Q9H9S3 AC245100.8-202ENST00000629247 1058 ntBASIC19.52■□□□□ 0.72
SEC61A2Q9H9S3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SEC61A2Q9H9S3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SEC61A2Q9H9S3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.52■□□□□ 0.72
SEC61A2Q9H9S3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SEC61A2Q9H9S3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SEC61A2Q9H9S3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.52■□□□□ 0.71
SEC61A2Q9H9S3 GUSBP5-202ENST00000510805 1989 ntBASIC19.52■□□□□ 0.71
SEC61A2Q9H9S3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SEC61A2Q9H9S3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEC61A2Q9H9S3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEC61A2Q9H9S3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEC61A2Q9H9S3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SEC61A2Q9H9S3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SEC61A2Q9H9S3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SEC61A2Q9H9S3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
SEC61A2Q9H9S3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEC61A2Q9H9S3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEC61A2Q9H9S3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.51■□□□□ 0.71
SEC61A2Q9H9S3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.51■□□□□ 0.71
SEC61A2Q9H9S3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SEC61A2Q9H9S3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEC61A2Q9H9S3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SEC61A2Q9H9S3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEC61A2Q9H9S3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEC61A2Q9H9S3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SEC61A2Q9H9S3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.51■□□□□ 0.71
SEC61A2Q9H9S3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEC61A2Q9H9S3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEC61A2Q9H9S3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEC61A2Q9H9S3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SEC61A2Q9H9S3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.5■□□□□ 0.71
SEC61A2Q9H9S3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEC61A2Q9H9S3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.5■□□□□ 0.71
SEC61A2Q9H9S3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms