Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
VCX3BQ9H321 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCX3BQ9H321 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.85■□□□□ 0.93
VCX3BQ9H321 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VCX3BQ9H321 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VCX3BQ9H321 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCX3BQ9H321 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCX3BQ9H321 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.85■□□□□ 0.93
VCX3BQ9H321 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCX3BQ9H321 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
VCX3BQ9H321 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
VCX3BQ9H321 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VCX3BQ9H321 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.84■□□□□ 0.93
VCX3BQ9H321 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCX3BQ9H321 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCX3BQ9H321 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.84■□□□□ 0.93
VCX3BQ9H321 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VCX3BQ9H321 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.84■□□□□ 0.93
VCX3BQ9H321 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCX3BQ9H321 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
VCX3BQ9H321 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VCX3BQ9H321 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.84■□□□□ 0.93
VCX3BQ9H321 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.84■□□□□ 0.93
VCX3BQ9H321 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.84■□□□□ 0.93
VCX3BQ9H321 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCX3BQ9H321 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
VCX3BQ9H321 ALDH1A3-203ENST00000557963 1670 ntBASIC20.83■□□□□ 0.93
VCX3BQ9H321 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.83■□□□□ 0.92
VCX3BQ9H321 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VCX3BQ9H321 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
VCX3BQ9H321 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VCX3BQ9H321 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.82■□□□□ 0.92
VCX3BQ9H321 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.82■□□□□ 0.92
VCX3BQ9H321 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCX3BQ9H321 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.82■□□□□ 0.92
VCX3BQ9H321 AC244015.2-201ENST00000616358 1861 ntBASIC20.82■□□□□ 0.92
VCX3BQ9H321 AC090877.2-201ENST00000558441 1738 ntBASIC20.82■□□□□ 0.92
VCX3BQ9H321 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.82■□□□□ 0.92
VCX3BQ9H321 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VCX3BQ9H321 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCX3BQ9H321 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VCX3BQ9H321 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VCX3BQ9H321 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCX3BQ9H321 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VCX3BQ9H321 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.81■□□□□ 0.92
VCX3BQ9H321 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCX3BQ9H321 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCX3BQ9H321 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCX3BQ9H321 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCX3BQ9H321 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCX3BQ9H321 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VCX3BQ9H321 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.81■□□□□ 0.92
VCX3BQ9H321 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCX3BQ9H321 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
VCX3BQ9H321 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCX3BQ9H321 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCX3BQ9H321 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCX3BQ9H321 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
VCX3BQ9H321 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.8■□□□□ 0.92
VCX3BQ9H321 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.8■□□□□ 0.92
VCX3BQ9H321 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
VCX3BQ9H321 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
VCX3BQ9H321 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCX3BQ9H321 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCX3BQ9H321 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VCX3BQ9H321 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCX3BQ9H321 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCX3BQ9H321 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
VCX3BQ9H321 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VCX3BQ9H321 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
VCX3BQ9H321 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCX3BQ9H321 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VCX3BQ9H321 AC087742.1-201ENST00000575880 1738 ntBASIC20.78■□□□□ 0.92
VCX3BQ9H321 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.78■□□□□ 0.92
VCX3BQ9H321 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
VCX3BQ9H321 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCX3BQ9H321 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VCX3BQ9H321 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
VCX3BQ9H321 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.78■□□□□ 0.92
VCX3BQ9H321 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VCX3BQ9H321 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VCX3BQ9H321 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCX3BQ9H321 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.78■□□□□ 0.92
VCX3BQ9H321 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
VCX3BQ9H321 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCX3BQ9H321 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
VCX3BQ9H321 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCX3BQ9H321 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCX3BQ9H321 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.77■□□□□ 0.92
VCX3BQ9H321 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCX3BQ9H321 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
VCX3BQ9H321 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
VCX3BQ9H321 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCX3BQ9H321 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
VCX3BQ9H321 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCX3BQ9H321 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.77■□□□□ 0.92
VCX3BQ9H321 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
VCX3BQ9H321 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.77■□□□□ 0.92
VCX3BQ9H321 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.77■□□□□ 0.92
VCX3BQ9H321 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms