Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CYSTM1Q9H1C7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CYSTM1Q9H1C7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 TNXA-203ENST00000507684 2038 ntBASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
CYSTM1Q9H1C7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
CYSTM1Q9H1C7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CYSTM1Q9H1C7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CYSTM1Q9H1C7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC12.87□□□□□ -0.35
CYSTM1Q9H1C7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CYSTM1Q9H1C7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
CYSTM1Q9H1C7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CYSTM1Q9H1C7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CYSTM1Q9H1C7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CYSTM1Q9H1C7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CYSTM1Q9H1C7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CYSTM1Q9H1C7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC12.87□□□□□ -0.35
CYSTM1Q9H1C7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CYSTM1Q9H1C7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CYSTM1Q9H1C7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.87□□□□□ -0.35
CYSTM1Q9H1C7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CYSTM1Q9H1C7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CYSTM1Q9H1C7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CYSTM1Q9H1C7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CYSTM1Q9H1C7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CYSTM1Q9H1C7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC12.86□□□□□ -0.35
CYSTM1Q9H1C7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CYSTM1Q9H1C7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC12.86□□□□□ -0.35
CYSTM1Q9H1C7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC12.86□□□□□ -0.35
CYSTM1Q9H1C7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CYSTM1Q9H1C7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC12.86□□□□□ -0.35
CYSTM1Q9H1C7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CYSTM1Q9H1C7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CYSTM1Q9H1C7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CYSTM1Q9H1C7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CYSTM1Q9H1C7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CYSTM1Q9H1C7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CYSTM1Q9H1C7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC12.86□□□□□ -0.35
CYSTM1Q9H1C7 AC012313.1-201ENST00000593393 3059 ntBASIC12.86□□□□□ -0.35
CYSTM1Q9H1C7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC12.86□□□□□ -0.35
CYSTM1Q9H1C7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CYSTM1Q9H1C7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC12.86□□□□□ -0.35
CYSTM1Q9H1C7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CYSTM1Q9H1C7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 FEM1AP1-201ENST00000431297 1995 ntBASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 AP000974.1-201ENST00000623909 2387 ntBASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CYSTM1Q9H1C7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CYSTM1Q9H1C7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC12.84□□□□□ -0.35
CYSTM1Q9H1C7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CYSTM1Q9H1C7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CYSTM1Q9H1C7 AC104581.1-202ENST00000635932 2618 ntBASIC12.84□□□□□ -0.35
CYSTM1Q9H1C7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CYSTM1Q9H1C7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
CYSTM1Q9H1C7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CYSTM1Q9H1C7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CYSTM1Q9H1C7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms