Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM2Q9C040 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM2Q9C040 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM2Q9C040 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM2Q9C040 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM2Q9C040 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM2Q9C040 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM2Q9C040 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.1■□□□□ 0.81
TRIM2Q9C040 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM2Q9C040 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.1■□□□□ 0.81
TRIM2Q9C040 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM2Q9C040 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM2Q9C040 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
TRIM2Q9C040 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM2Q9C040 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM2Q9C040 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM2Q9C040 AC019069.1-201ENST00000610008 1333 ntBASIC20.09■□□□□ 0.81
TRIM2Q9C040 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM2Q9C040 MIR3621-201ENST00000580529 85 ntBASIC20.09■□□□□ 0.81
TRIM2Q9C040 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM2Q9C040 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM2Q9C040 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM2Q9C040 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM2Q9C040 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM2Q9C040 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM2Q9C040 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
TRIM2Q9C040 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM2Q9C040 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
TRIM2Q9C040 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM2Q9C040 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM2Q9C040 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TRIM2Q9C040 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM2Q9C040 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.08■□□□□ 0.81
TRIM2Q9C040 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM2Q9C040 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM2Q9C040 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM2Q9C040 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM2Q9C040 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.08■□□□□ 0.81
TRIM2Q9C040 AC131281.2-201ENST00000520478 145 ntBASIC20.08■□□□□ 0.81
TRIM2Q9C040 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.08■□□□□ 0.81
TRIM2Q9C040 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM2Q9C040 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.08■□□□□ 0.8
TRIM2Q9C040 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM2Q9C040 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.08■□□□□ 0.8
TRIM2Q9C040 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM2Q9C040 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM2Q9C040 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.8
TRIM2Q9C040 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
TRIM2Q9C040 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM2Q9C040 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM2Q9C040 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM2Q9C040 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TRIM2Q9C040 AC139530.1-201ENST00000575312 1977 ntBASIC20.07■□□□□ 0.8
TRIM2Q9C040 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM2Q9C040 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM2Q9C040 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM2Q9C040 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM2Q9C040 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM2Q9C040 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM2Q9C040 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM2Q9C040 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM2Q9C040 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM2Q9C040 AC092053.2-201ENST00000640557 1818 ntBASIC20.06■□□□□ 0.8
TRIM2Q9C040 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM2Q9C040 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM2Q9C040 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
TRIM2Q9C040 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM2Q9C040 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.06■□□□□ 0.8
TRIM2Q9C040 AC080038.3-201ENST00000623346 1952 ntBASIC20.06■□□□□ 0.8
TRIM2Q9C040 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM2Q9C040 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM2Q9C040 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM2Q9C040 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM2Q9C040 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM2Q9C040 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM2Q9C040 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TRIM2Q9C040 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM2Q9C040 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM2Q9C040 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM2Q9C040 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM2Q9C040 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM2Q9C040 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM2Q9C040 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM2Q9C040 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TRIM2Q9C040 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM2Q9C040 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TRIM2Q9C040 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM2Q9C040 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM2Q9C040 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM2Q9C040 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM2Q9C040 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM2Q9C040 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.04■□□□□ 0.8
TRIM2Q9C040 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM2Q9C040 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM2Q9C040 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
TRIM2Q9C040 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TRIM2Q9C040 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.04■□□□□ 0.8
TRIM2Q9C040 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM2Q9C040 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM2Q9C040 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms