Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
LCE3DQ9BYE3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LCE3DQ9BYE3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LCE3DQ9BYE3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC5.91□□□□□ -1.46
LCE3DQ9BYE3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 AL121603.2-201ENST00000557373 2117 ntBASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 SMPD5-203ENST00000639008 1464 ntBASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 AC139530.1-201ENST00000575312 1977 ntBASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 AL022069.1-201ENST00000568025 1636 ntBASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 AC026310.3-201ENST00000625186 2373 ntBASIC5.9□□□□□ -1.46
LCE3DQ9BYE3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LCE3DQ9BYE3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 BCL2-203ENST00000589955 5011 ntBASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 DUX4L11-201ENST00000611504 1267 ntBASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 DUX4L12-201ENST00000614593 1267 ntBASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 DUX4L14-201ENST00000621227 1267 ntBASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LCE3DQ9BYE3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms