Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RTFDC1Q9BY42 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RTFDC1Q9BY42 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RTFDC1Q9BY42 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RTFDC1Q9BY42 AC004687.1-201ENST00000579003 1625 ntBASIC26.94■■□□□ 1.9
RTFDC1Q9BY42 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
RTFDC1Q9BY42 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RTFDC1Q9BY42 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
RTFDC1Q9BY42 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RTFDC1Q9BY42 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC26.94■■□□□ 1.9
RTFDC1Q9BY42 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RTFDC1Q9BY42 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
RTFDC1Q9BY42 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
RTFDC1Q9BY42 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.93■■□□□ 1.9
RTFDC1Q9BY42 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RTFDC1Q9BY42 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RTFDC1Q9BY42 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC26.93■■□□□ 1.9
RTFDC1Q9BY42 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
RTFDC1Q9BY42 TESC-206ENST00000541210 936 ntTSL 3 BASIC26.93■■□□□ 1.9
RTFDC1Q9BY42 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.93■■□□□ 1.9
RTFDC1Q9BY42 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
RTFDC1Q9BY42 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
RTFDC1Q9BY42 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RTFDC1Q9BY42 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC26.92■■□□□ 1.9
RTFDC1Q9BY42 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
RTFDC1Q9BY42 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC26.92■■□□□ 1.9
RTFDC1Q9BY42 AL355802.2-201ENST00000402069 882 ntBASIC26.92■■□□□ 1.9
RTFDC1Q9BY42 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RTFDC1Q9BY42 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RTFDC1Q9BY42 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC26.91■■□□□ 1.9
RTFDC1Q9BY42 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.91■■□□□ 1.9
RTFDC1Q9BY42 LINC00543-201ENST00000567234 1845 ntBASIC26.91■■□□□ 1.9
RTFDC1Q9BY42 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RTFDC1Q9BY42 SPI1-203ENST00000533030 661 ntTSL 2 BASIC26.91■■□□□ 1.9
RTFDC1Q9BY42 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RTFDC1Q9BY42 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
RTFDC1Q9BY42 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RTFDC1Q9BY42 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RTFDC1Q9BY42 ESRRAP2-201ENST00000418437 1549 ntBASIC26.9■■□□□ 1.9
RTFDC1Q9BY42 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
RTFDC1Q9BY42 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RTFDC1Q9BY42 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.9■■□□□ 1.9
RTFDC1Q9BY42 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RTFDC1Q9BY42 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RTFDC1Q9BY42 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
RTFDC1Q9BY42 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC26.9■■□□□ 1.9
RTFDC1Q9BY42 MDK-213ENST00000617138 635 ntTSL 2 BASIC26.9■■□□□ 1.9
RTFDC1Q9BY42 LINC01124-201ENST00000409786 2117 ntBASIC26.9■■□□□ 1.9
RTFDC1Q9BY42 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RTFDC1Q9BY42 AC079630.1-202ENST00000618127 1840 ntBASIC26.89■■□□□ 1.9
RTFDC1Q9BY42 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RTFDC1Q9BY42 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC26.89■■□□□ 1.9
RTFDC1Q9BY42 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
RTFDC1Q9BY42 AC087239.1-201ENST00000622671 572 ntBASIC26.89■■□□□ 1.9
RTFDC1Q9BY42 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
RTFDC1Q9BY42 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.89■■□□□ 1.89
RTFDC1Q9BY42 AL139125.2-201ENST00000623134 1869 ntBASIC26.89■■□□□ 1.89
RTFDC1Q9BY42 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RTFDC1Q9BY42 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
RTFDC1Q9BY42 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC26.88■■□□□ 1.89
RTFDC1Q9BY42 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
RTFDC1Q9BY42 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC26.88■■□□□ 1.89
RTFDC1Q9BY42 MIR663A-201ENST00000385250 93 ntBASIC26.88■■□□□ 1.89
RTFDC1Q9BY42 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC26.88■■□□□ 1.89
RTFDC1Q9BY42 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.88■■□□□ 1.89
RTFDC1Q9BY42 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RTFDC1Q9BY42 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RTFDC1Q9BY42 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
RTFDC1Q9BY42 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.88■■□□□ 1.89
RTFDC1Q9BY42 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RTFDC1Q9BY42 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RTFDC1Q9BY42 OXCT2P1-201ENST00000447263 1535 ntBASIC26.87■■□□□ 1.89
RTFDC1Q9BY42 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
RTFDC1Q9BY42 AC079140.4-201ENST00000507448 529 ntBASIC26.87■■□□□ 1.89
RTFDC1Q9BY42 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC26.87■■□□□ 1.89
RTFDC1Q9BY42 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC26.87■■□□□ 1.89
RTFDC1Q9BY42 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
RTFDC1Q9BY42 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RTFDC1Q9BY42 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
RTFDC1Q9BY42 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
RTFDC1Q9BY42 GPX1P1-201ENST00000388829 606 ntBASIC26.86■■□□□ 1.89
RTFDC1Q9BY42 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC26.86■■□□□ 1.89
RTFDC1Q9BY42 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC26.86■■□□□ 1.89
RTFDC1Q9BY42 AC004812.2-201ENST00000611079 2094 ntBASIC26.86■■□□□ 1.89
RTFDC1Q9BY42 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
RTFDC1Q9BY42 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.85■■□□□ 1.89
RTFDC1Q9BY42 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC26.85■■□□□ 1.89
RTFDC1Q9BY42 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC26.85■■□□□ 1.89
RTFDC1Q9BY42 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC26.85■■□□□ 1.89
RTFDC1Q9BY42 AC142086.2-201ENST00000569753 217 ntBASIC26.85■■□□□ 1.89
RTFDC1Q9BY42 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RTFDC1Q9BY42 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RTFDC1Q9BY42 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.85■■□□□ 1.89
RTFDC1Q9BY42 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RTFDC1Q9BY42 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.85■■□□□ 1.89
RTFDC1Q9BY42 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RTFDC1Q9BY42 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
RTFDC1Q9BY42 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RTFDC1Q9BY42 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RTFDC1Q9BY42 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms