Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
RPAP1Q9BWH6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC26.69■■□□□ 1.86
RPAP1Q9BWH6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RPAP1Q9BWH6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RPAP1Q9BWH6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RPAP1Q9BWH6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RPAP1Q9BWH6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC26.69■■□□□ 1.86
RPAP1Q9BWH6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC26.69■■□□□ 1.86
RPAP1Q9BWH6 AC123595.1-201ENST00000440769 1046 ntBASIC26.69■■□□□ 1.86
RPAP1Q9BWH6 OR2I1P-207ENST00000453522 948 ntBASIC26.69■■□□□ 1.86
RPAP1Q9BWH6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RPAP1Q9BWH6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.68■■□□□ 1.86
RPAP1Q9BWH6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.68■■□□□ 1.86
RPAP1Q9BWH6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
RPAP1Q9BWH6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
RPAP1Q9BWH6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
RPAP1Q9BWH6 AC133637.1-201ENST00000624115 1537 ntBASIC26.68■■□□□ 1.86
RPAP1Q9BWH6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC26.68■■□□□ 1.86
RPAP1Q9BWH6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RPAP1Q9BWH6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
RPAP1Q9BWH6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.67■■□□□ 1.86
RPAP1Q9BWH6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RPAP1Q9BWH6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RPAP1Q9BWH6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
RPAP1Q9BWH6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.67■■□□□ 1.86
RPAP1Q9BWH6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
RPAP1Q9BWH6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC26.67■■□□□ 1.86
RPAP1Q9BWH6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC26.67■■□□□ 1.86
RPAP1Q9BWH6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RPAP1Q9BWH6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RPAP1Q9BWH6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
RPAP1Q9BWH6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.66■■□□□ 1.86
RPAP1Q9BWH6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
RPAP1Q9BWH6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RPAP1Q9BWH6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
RPAP1Q9BWH6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RPAP1Q9BWH6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RPAP1Q9BWH6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RPAP1Q9BWH6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC26.66■■□□□ 1.86
RPAP1Q9BWH6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RPAP1Q9BWH6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.65■■□□□ 1.86
RPAP1Q9BWH6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC26.65■■□□□ 1.86
RPAP1Q9BWH6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.65■■□□□ 1.86
RPAP1Q9BWH6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.65■■□□□ 1.86
RPAP1Q9BWH6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RPAP1Q9BWH6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RPAP1Q9BWH6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC26.65■■□□□ 1.86
RPAP1Q9BWH6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
RPAP1Q9BWH6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC26.65■■□□□ 1.86
RPAP1Q9BWH6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RPAP1Q9BWH6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.65■■□□□ 1.86
RPAP1Q9BWH6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC26.65■■□□□ 1.86
RPAP1Q9BWH6 AL354811.1-201ENST00000610286 706 ntBASIC26.65■■□□□ 1.86
RPAP1Q9BWH6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
RPAP1Q9BWH6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RPAP1Q9BWH6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.86
RPAP1Q9BWH6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RPAP1Q9BWH6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC26.64■■□□□ 1.86
RPAP1Q9BWH6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RPAP1Q9BWH6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
RPAP1Q9BWH6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RPAP1Q9BWH6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC26.64■■□□□ 1.86
RPAP1Q9BWH6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.64■■□□□ 1.86
RPAP1Q9BWH6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
RPAP1Q9BWH6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
RPAP1Q9BWH6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.64■■□□□ 1.86
RPAP1Q9BWH6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC26.64■■□□□ 1.86
RPAP1Q9BWH6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.64■■□□□ 1.85
RPAP1Q9BWH6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
RPAP1Q9BWH6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
RPAP1Q9BWH6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC26.63■■□□□ 1.85
RPAP1Q9BWH6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
RPAP1Q9BWH6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
RPAP1Q9BWH6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
RPAP1Q9BWH6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.63■■□□□ 1.85
RPAP1Q9BWH6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC26.63■■□□□ 1.85
RPAP1Q9BWH6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC26.63■■□□□ 1.85
RPAP1Q9BWH6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC26.63■■□□□ 1.85
RPAP1Q9BWH6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC26.63■■□□□ 1.85
RPAP1Q9BWH6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.63■■□□□ 1.85
RPAP1Q9BWH6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.63■■□□□ 1.85
RPAP1Q9BWH6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC26.63■■□□□ 1.85
RPAP1Q9BWH6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RPAP1Q9BWH6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RPAP1Q9BWH6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.62■■□□□ 1.85
RPAP1Q9BWH6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC26.62■■□□□ 1.85
RPAP1Q9BWH6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RPAP1Q9BWH6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RPAP1Q9BWH6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC26.62■■□□□ 1.85
RPAP1Q9BWH6 AC022517.1-201ENST00000592429 346 ntBASIC26.62■■□□□ 1.85
RPAP1Q9BWH6 IKBKGP1-201ENST00000612193 1073 ntBASIC26.62■■□□□ 1.85
RPAP1Q9BWH6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RPAP1Q9BWH6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC26.62■■□□□ 1.85
RPAP1Q9BWH6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC26.61■■□□□ 1.85
RPAP1Q9BWH6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RPAP1Q9BWH6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RPAP1Q9BWH6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC26.61■■□□□ 1.85
RPAP1Q9BWH6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RPAP1Q9BWH6 AC092437.1-201ENST00000624794 1048 ntBASIC26.61■■□□□ 1.85
RPAP1Q9BWH6 RARRES2P11-201ENST00000635158 484 ntBASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms