Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CHRDL1Q9BU40 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRDL1Q9BU40 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRDL1Q9BU40 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRDL1Q9BU40 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRDL1Q9BU40 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CHRDL1Q9BU40 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CHRDL1Q9BU40 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRDL1Q9BU40 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
CHRDL1Q9BU40 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.3■□□□□ 0.36
CHRDL1Q9BU40 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRDL1Q9BU40 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRDL1Q9BU40 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CHRDL1Q9BU40 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRDL1Q9BU40 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRDL1Q9BU40 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRDL1Q9BU40 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRDL1Q9BU40 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.3■□□□□ 0.36
CHRDL1Q9BU40 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRDL1Q9BU40 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRDL1Q9BU40 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRDL1Q9BU40 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRDL1Q9BU40 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CHRDL1Q9BU40 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.29■□□□□ 0.36
CHRDL1Q9BU40 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRDL1Q9BU40 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRDL1Q9BU40 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRDL1Q9BU40 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CHRDL1Q9BU40 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRDL1Q9BU40 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRDL1Q9BU40 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRDL1Q9BU40 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRDL1Q9BU40 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRDL1Q9BU40 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRDL1Q9BU40 AC009102.2-201ENST00000606772 1639 ntBASIC17.29■□□□□ 0.36
CHRDL1Q9BU40 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRDL1Q9BU40 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CHRDL1Q9BU40 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRDL1Q9BU40 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRDL1Q9BU40 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CHRDL1Q9BU40 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CHRDL1Q9BU40 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.28■□□□□ 0.36
CHRDL1Q9BU40 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.28■□□□□ 0.36
CHRDL1Q9BU40 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRDL1Q9BU40 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHRDL1Q9BU40 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRDL1Q9BU40 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRDL1Q9BU40 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CHRDL1Q9BU40 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRDL1Q9BU40 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.27■□□□□ 0.36
CHRDL1Q9BU40 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.27■□□□□ 0.36
CHRDL1Q9BU40 GUSBP5-201ENST00000418136 578 ntBASIC17.27■□□□□ 0.36
CHRDL1Q9BU40 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
CHRDL1Q9BU40 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.27■□□□□ 0.36
CHRDL1Q9BU40 MIR6724-1-201ENST00000616420 92 ntBASIC17.27■□□□□ 0.36
CHRDL1Q9BU40 MIR6724-2-201ENST00000616483 92 ntBASIC17.27■□□□□ 0.36
CHRDL1Q9BU40 MIR6724-4-201ENST00000617390 92 ntBASIC17.27■□□□□ 0.36
CHRDL1Q9BU40 MIR6724-3-201ENST00000622482 92 ntBASIC17.27■□□□□ 0.36
CHRDL1Q9BU40 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.27■□□□□ 0.36
CHRDL1Q9BU40 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CHRDL1Q9BU40 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHRDL1Q9BU40 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CHRDL1Q9BU40 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.27■□□□□ 0.35
CHRDL1Q9BU40 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHRDL1Q9BU40 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CHRDL1Q9BU40 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRDL1Q9BU40 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CHRDL1Q9BU40 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRDL1Q9BU40 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.26■□□□□ 0.35
CHRDL1Q9BU40 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHRDL1Q9BU40 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRDL1Q9BU40 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRDL1Q9BU40 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CHRDL1Q9BU40 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHRDL1Q9BU40 AL024507.2-201ENST00000606070 2574 ntBASIC17.26■□□□□ 0.35
CHRDL1Q9BU40 KRT16P3-201ENST00000439127 1283 ntBASIC17.26■□□□□ 0.35
CHRDL1Q9BU40 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.26■□□□□ 0.35
CHRDL1Q9BU40 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.26■□□□□ 0.35
CHRDL1Q9BU40 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.26■□□□□ 0.35
CHRDL1Q9BU40 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.26■□□□□ 0.35
CHRDL1Q9BU40 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.26■□□□□ 0.35
CHRDL1Q9BU40 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.26■□□□□ 0.35
CHRDL1Q9BU40 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRDL1Q9BU40 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRDL1Q9BU40 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRDL1Q9BU40 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRDL1Q9BU40 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRDL1Q9BU40 LINC01529-204ENST00000636474 1715 ntBASIC17.25■□□□□ 0.35
CHRDL1Q9BU40 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRDL1Q9BU40 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.25■□□□□ 0.35
CHRDL1Q9BU40 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRDL1Q9BU40 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRDL1Q9BU40 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.25■□□□□ 0.35
CHRDL1Q9BU40 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.25■□□□□ 0.35
CHRDL1Q9BU40 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRDL1Q9BU40 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRDL1Q9BU40 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRDL1Q9BU40 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CHRDL1Q9BU40 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRDL1Q9BU40 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms