Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.54■□□□□ 0.56
FOXC2Q99958 AC092803.2-201ENST00000564287 1899 ntBASIC18.54■□□□□ 0.56
FOXC2Q99958 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
FOXC2Q99958 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.54■□□□□ 0.56
FOXC2Q99958 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
FOXC2Q99958 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.54■□□□□ 0.56
FOXC2Q99958 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXC2Q99958 POU5F1P3-201ENST00000428824 1078 ntBASIC18.54■□□□□ 0.56
FOXC2Q99958 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.54■□□□□ 0.56
FOXC2Q99958 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FOXC2Q99958 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.54■□□□□ 0.56
FOXC2Q99958 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
FOXC2Q99958 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.54■□□□□ 0.56
FOXC2Q99958 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXC2Q99958 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXC2Q99958 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.53■□□□□ 0.56
FOXC2Q99958 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.53■□□□□ 0.56
FOXC2Q99958 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXC2Q99958 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXC2Q99958 DUX4L16-201ENST00000555130 1264 ntBASIC18.53■□□□□ 0.56
FOXC2Q99958 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.53■□□□□ 0.56
FOXC2Q99958 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.53■□□□□ 0.56
FOXC2Q99958 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.53■□□□□ 0.56
FOXC2Q99958 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXC2Q99958 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXC2Q99958 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXC2Q99958 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
FOXC2Q99958 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.52■□□□□ 0.56
FOXC2Q99958 KRT18P29-201ENST00000397031 1267 ntBASIC18.52■□□□□ 0.56
FOXC2Q99958 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
FOXC2Q99958 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXC2Q99958 HLA-L-211ENST00000482052 1765 ntBASIC18.52■□□□□ 0.55
FOXC2Q99958 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
FOXC2Q99958 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
FOXC2Q99958 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXC2Q99958 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXC2Q99958 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXC2Q99958 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXC2Q99958 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXC2Q99958 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXC2Q99958 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXC2Q99958 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXC2Q99958 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.51■□□□□ 0.55
FOXC2Q99958 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.51■□□□□ 0.55
FOXC2Q99958 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXC2Q99958 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXC2Q99958 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.51■□□□□ 0.55
FOXC2Q99958 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.51■□□□□ 0.55
FOXC2Q99958 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.51■□□□□ 0.55
FOXC2Q99958 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXC2Q99958 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXC2Q99958 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXC2Q99958 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXC2Q99958 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXC2Q99958 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXC2Q99958 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXC2Q99958 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
FOXC2Q99958 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
FOXC2Q99958 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXC2Q99958 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXC2Q99958 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXC2Q99958 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXC2Q99958 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
FOXC2Q99958 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
FOXC2Q99958 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXC2Q99958 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.5■□□□□ 0.55
FOXC2Q99958 AC087239.1-201ENST00000622671 572 ntBASIC18.5■□□□□ 0.55
FOXC2Q99958 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXC2Q99958 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXC2Q99958 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
FOXC2Q99958 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXC2Q99958 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXC2Q99958 AC144652.1-201ENST00000609974 1624 ntBASIC18.49■□□□□ 0.55
FOXC2Q99958 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXC2Q99958 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.49■□□□□ 0.55
FOXC2Q99958 SMUG1P1-201ENST00000590640 811 ntBASIC18.49■□□□□ 0.55
FOXC2Q99958 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXC2Q99958 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
FOXC2Q99958 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXC2Q99958 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXC2Q99958 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
FOXC2Q99958 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXC2Q99958 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXC2Q99958 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
FOXC2Q99958 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXC2Q99958 AF201337.1-201ENST00000520239 748 ntBASIC18.48■□□□□ 0.55
FOXC2Q99958 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXC2Q99958 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.48■□□□□ 0.55
FOXC2Q99958 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXC2Q99958 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXC2Q99958 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXC2Q99958 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.48■□□□□ 0.55
FOXC2Q99958 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXC2Q99958 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXC2Q99958 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXC2Q99958 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXC2Q99958 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXC2Q99958 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.47■□□□□ 0.55
FOXC2Q99958 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
FOXC2Q99958 AP006294.2-201ENST00000641667 209 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms