Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
ABCA3Q99758 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC29.72■■■□□ 2.35
ABCA3Q99758 PARP1-202ENST00000366792 553 ntTSL 3 BASIC29.72■■■□□ 2.35
ABCA3Q99758 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC29.72■■■□□ 2.35
ABCA3Q99758 AC008687.6-201ENST00000596318 630 ntBASIC29.72■■■□□ 2.35
ABCA3Q99758 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC29.72■■■□□ 2.35
ABCA3Q99758 AC005224.4-201ENST00000583262 1652 ntBASIC29.72■■■□□ 2.35
ABCA3Q99758 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC29.72■■■□□ 2.35
ABCA3Q99758 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
ABCA3Q99758 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC29.71■■■□□ 2.35
ABCA3Q99758 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC29.71■■■□□ 2.35
ABCA3Q99758 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC29.71■■■□□ 2.35
ABCA3Q99758 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
ABCA3Q99758 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
ABCA3Q99758 AC083906.2-201ENST00000511578 360 ntBASIC29.71■■■□□ 2.35
ABCA3Q99758 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC29.71■■■□□ 2.35
ABCA3Q99758 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
ABCA3Q99758 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC29.7■■■□□ 2.34
ABCA3Q99758 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC29.7■■■□□ 2.34
ABCA3Q99758 AC079630.1-202ENST00000618127 1840 ntBASIC29.7■■■□□ 2.34
ABCA3Q99758 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC29.7■■■□□ 2.34
ABCA3Q99758 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC29.7■■■□□ 2.34
ABCA3Q99758 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
ABCA3Q99758 AC010141.3-201ENST00000456659 717 ntBASIC29.69■■■□□ 2.34
ABCA3Q99758 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC29.69■■■□□ 2.34
ABCA3Q99758 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
ABCA3Q99758 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC29.69■■■□□ 2.34
ABCA3Q99758 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC29.68■■■□□ 2.34
ABCA3Q99758 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC29.68■■■□□ 2.34
ABCA3Q99758 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC29.68■■■□□ 2.34
ABCA3Q99758 RGMA-211ENST00000557420 989 ntTSL 3 BASIC29.68■■■□□ 2.34
ABCA3Q99758 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC29.68■■■□□ 2.34
ABCA3Q99758 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC29.68■■■□□ 2.34
ABCA3Q99758 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
ABCA3Q99758 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
ABCA3Q99758 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC29.68■■■□□ 2.34
ABCA3Q99758 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC29.67■■■□□ 2.34
ABCA3Q99758 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
ABCA3Q99758 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
ABCA3Q99758 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
ABCA3Q99758 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
ABCA3Q99758 AC098590.1-201ENST00000468126 897 ntBASIC29.67■■■□□ 2.34
ABCA3Q99758 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
ABCA3Q99758 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
ABCA3Q99758 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
ABCA3Q99758 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
ABCA3Q99758 AC007322.1-201ENST00000426983 750 ntBASIC29.66■■■□□ 2.34
ABCA3Q99758 TBCB-214ENST00000629269 413 ntTSL 5 BASIC29.66■■■□□ 2.34
ABCA3Q99758 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
ABCA3Q99758 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC29.66■■■□□ 2.34
ABCA3Q99758 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
ABCA3Q99758 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
ABCA3Q99758 AC073210.2-201ENST00000430369 194 ntBASIC29.65■■■□□ 2.34
ABCA3Q99758 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC29.65■■■□□ 2.34
ABCA3Q99758 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC29.65■■■□□ 2.34
ABCA3Q99758 ITM2C-210ENST00000620962 501 ntBASIC29.65■■■□□ 2.34
ABCA3Q99758 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
ABCA3Q99758 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
ABCA3Q99758 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
ABCA3Q99758 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
ABCA3Q99758 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC29.63■■■□□ 2.33
ABCA3Q99758 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC29.63■■■□□ 2.33
ABCA3Q99758 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
ABCA3Q99758 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
ABCA3Q99758 CYP2T1P-201ENST00000432607 1285 ntBASIC29.63■■■□□ 2.33
ABCA3Q99758 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC29.63■■■□□ 2.33
ABCA3Q99758 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
ABCA3Q99758 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
ABCA3Q99758 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
ABCA3Q99758 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
ABCA3Q99758 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC29.62■■■□□ 2.33
ABCA3Q99758 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ABCA3Q99758 APTR-203ENST00000430801 583 ntTSL 5 BASIC29.62■■■□□ 2.33
ABCA3Q99758 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC29.62■■■□□ 2.33
ABCA3Q99758 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
ABCA3Q99758 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
ABCA3Q99758 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC29.62■■■□□ 2.33
ABCA3Q99758 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
ABCA3Q99758 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC29.62■■■□□ 2.33
ABCA3Q99758 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
ABCA3Q99758 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ABCA3Q99758 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ABCA3Q99758 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
ABCA3Q99758 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
ABCA3Q99758 POU5F1P3-201ENST00000428824 1078 ntBASIC29.61■■■□□ 2.33
ABCA3Q99758 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC29.61■■■□□ 2.33
ABCA3Q99758 RPS2P52-201ENST00000469610 820 ntBASIC29.61■■■□□ 2.33
ABCA3Q99758 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC29.61■■■□□ 2.33
ABCA3Q99758 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
ABCA3Q99758 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC29.61■■■□□ 2.33
ABCA3Q99758 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
ABCA3Q99758 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
ABCA3Q99758 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC29.6■■■□□ 2.33
ABCA3Q99758 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
ABCA3Q99758 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
ABCA3Q99758 AF201337.1-201ENST00000520239 748 ntBASIC29.6■■■□□ 2.33
ABCA3Q99758 BRI3-207ENST00000539286 699 ntTSL 2 BASIC29.6■■■□□ 2.33
ABCA3Q99758 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC29.6■■■□□ 2.33
ABCA3Q99758 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
ABCA3Q99758 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.6■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms