Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX18Q96RF0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
SNX18Q96RF0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.84■□□□□ 0.77
SNX18Q96RF0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX18Q96RF0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.84■□□□□ 0.77
SNX18Q96RF0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.84■□□□□ 0.77
SNX18Q96RF0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX18Q96RF0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX18Q96RF0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX18Q96RF0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX18Q96RF0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX18Q96RF0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SNX18Q96RF0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
SNX18Q96RF0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX18Q96RF0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNX18Q96RF0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.83■□□□□ 0.77
SNX18Q96RF0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNX18Q96RF0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SNX18Q96RF0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.83■□□□□ 0.77
SNX18Q96RF0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.83■□□□□ 0.77
SNX18Q96RF0 LINC01529-204ENST00000636474 1715 ntBASIC19.83■□□□□ 0.77
SNX18Q96RF0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SNX18Q96RF0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SNX18Q96RF0 TSPY9P-201ENST00000440215 945 ntBASIC19.83■□□□□ 0.77
SNX18Q96RF0 TSPY11P-201ENST00000442607 1045 ntBASIC19.83■□□□□ 0.77
SNX18Q96RF0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.83■□□□□ 0.77
SNX18Q96RF0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.83■□□□□ 0.76
SNX18Q96RF0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX18Q96RF0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.83■□□□□ 0.76
SNX18Q96RF0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX18Q96RF0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX18Q96RF0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX18Q96RF0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.82■□□□□ 0.76
SNX18Q96RF0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNX18Q96RF0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SNX18Q96RF0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX18Q96RF0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.82■□□□□ 0.76
SNX18Q96RF0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
SNX18Q96RF0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX18Q96RF0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.82■□□□□ 0.76
SNX18Q96RF0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX18Q96RF0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX18Q96RF0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SNX18Q96RF0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.82■□□□□ 0.76
SNX18Q96RF0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNX18Q96RF0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SNX18Q96RF0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNX18Q96RF0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SNX18Q96RF0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.82■□□□□ 0.76
SNX18Q96RF0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.82■□□□□ 0.76
SNX18Q96RF0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
SNX18Q96RF0 PKD1P6-201ENST00000343738 4769 ntBASIC19.81■□□□□ 0.76
SNX18Q96RF0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX18Q96RF0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNX18Q96RF0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.81■□□□□ 0.76
SNX18Q96RF0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.81■□□□□ 0.76
SNX18Q96RF0 KRT16P3-201ENST00000439127 1283 ntBASIC19.81■□□□□ 0.76
SNX18Q96RF0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
SNX18Q96RF0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.81■□□□□ 0.76
SNX18Q96RF0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX18Q96RF0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.81■□□□□ 0.76
SNX18Q96RF0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX18Q96RF0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX18Q96RF0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.81■□□□□ 0.76
SNX18Q96RF0 AC242852.2-201ENST00000615738 1807 ntBASIC19.81■□□□□ 0.76
SNX18Q96RF0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX18Q96RF0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SNX18Q96RF0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNX18Q96RF0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX18Q96RF0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
SNX18Q96RF0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.8■□□□□ 0.76
SNX18Q96RF0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX18Q96RF0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNX18Q96RF0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SNX18Q96RF0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.8■□□□□ 0.76
SNX18Q96RF0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNX18Q96RF0 UNC93B8-201ENST00000511903 705 ntBASIC19.8■□□□□ 0.76
SNX18Q96RF0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.8■□□□□ 0.76
SNX18Q96RF0 DUX4L4-201ENST00000566884 1269 ntBASIC19.8■□□□□ 0.76
SNX18Q96RF0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SNX18Q96RF0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX18Q96RF0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX18Q96RF0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX18Q96RF0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX18Q96RF0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX18Q96RF0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX18Q96RF0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX18Q96RF0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX18Q96RF0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX18Q96RF0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX18Q96RF0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNX18Q96RF0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNX18Q96RF0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX18Q96RF0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX18Q96RF0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
SNX18Q96RF0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX18Q96RF0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX18Q96RF0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX18Q96RF0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX18Q96RF0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms