Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.82■□□□□ 0.6
CSMD1Q96PZ7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSMD1Q96PZ7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSMD1Q96PZ7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.81■□□□□ 0.6
CSMD1Q96PZ7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSMD1Q96PZ7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSMD1Q96PZ7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.81■□□□□ 0.6
CSMD1Q96PZ7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.81■□□□□ 0.6
CSMD1Q96PZ7 AC231657.2-201ENST00000624556 255 ntBASIC18.81■□□□□ 0.6
CSMD1Q96PZ7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.81■□□□□ 0.6
CSMD1Q96PZ7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSMD1Q96PZ7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSMD1Q96PZ7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.81■□□□□ 0.6
CSMD1Q96PZ7 RNA5SP413-201ENST00000516373 109 ntBASIC18.81■□□□□ 0.6
CSMD1Q96PZ7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.81■□□□□ 0.6
CSMD1Q96PZ7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSMD1Q96PZ7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.8■□□□□ 0.6
CSMD1Q96PZ7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.8■□□□□ 0.6
CSMD1Q96PZ7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSMD1Q96PZ7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSMD1Q96PZ7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.8■□□□□ 0.6
CSMD1Q96PZ7 UNC93B4-201ENST00000505679 747 ntBASIC18.8■□□□□ 0.6
CSMD1Q96PZ7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CSMD1Q96PZ7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CSMD1Q96PZ7 AC007322.1-201ENST00000426983 750 ntBASIC18.8■□□□□ 0.6
CSMD1Q96PZ7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CSMD1Q96PZ7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSMD1Q96PZ7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSMD1Q96PZ7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CSMD1Q96PZ7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.8■□□□□ 0.6
CSMD1Q96PZ7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.8■□□□□ 0.6
CSMD1Q96PZ7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.8■□□□□ 0.6
CSMD1Q96PZ7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
CSMD1Q96PZ7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSMD1Q96PZ7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSMD1Q96PZ7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSMD1Q96PZ7 AC128676.1-201ENST00000454392 318 ntBASIC18.79■□□□□ 0.6
CSMD1Q96PZ7 AF201337.1-201ENST00000520239 748 ntBASIC18.79■□□□□ 0.6
CSMD1Q96PZ7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CSMD1Q96PZ7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CSMD1Q96PZ7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CSMD1Q96PZ7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSMD1Q96PZ7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSMD1Q96PZ7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSMD1Q96PZ7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSMD1Q96PZ7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSMD1Q96PZ7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.78■□□□□ 0.6
CSMD1Q96PZ7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.78■□□□□ 0.6
CSMD1Q96PZ7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CSMD1Q96PZ7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CSMD1Q96PZ7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSMD1Q96PZ7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CSMD1Q96PZ7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSMD1Q96PZ7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSMD1Q96PZ7 AC133041.1-202ENST00000642053 222 ntBASIC18.78■□□□□ 0.6
CSMD1Q96PZ7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CSMD1Q96PZ7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSMD1Q96PZ7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSMD1Q96PZ7 RPS2P4-201ENST00000476944 856 ntBASIC18.78■□□□□ 0.6
CSMD1Q96PZ7 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.78■□□□□ 0.6
CSMD1Q96PZ7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.78■□□□□ 0.6
CSMD1Q96PZ7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CSMD1Q96PZ7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSMD1Q96PZ7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSMD1Q96PZ7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CSMD1Q96PZ7 RARRES2P4-201ENST00000514074 484 ntBASIC18.77■□□□□ 0.6
CSMD1Q96PZ7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CSMD1Q96PZ7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CSMD1Q96PZ7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.77■□□□□ 0.6
CSMD1Q96PZ7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.77■□□□□ 0.6
CSMD1Q96PZ7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CSMD1Q96PZ7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSMD1Q96PZ7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CSMD1Q96PZ7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.77■□□□□ 0.59
CSMD1Q96PZ7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSMD1Q96PZ7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSMD1Q96PZ7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSMD1Q96PZ7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.76■□□□□ 0.59
CSMD1Q96PZ7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.76■□□□□ 0.59
CSMD1Q96PZ7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CSMD1Q96PZ7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.76■□□□□ 0.59
CSMD1Q96PZ7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSMD1Q96PZ7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSMD1Q96PZ7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSMD1Q96PZ7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSMD1Q96PZ7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSMD1Q96PZ7 AC141586.4-201ENST00000624558 1573 ntBASIC18.76■□□□□ 0.59
CSMD1Q96PZ7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CSMD1Q96PZ7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSMD1Q96PZ7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.75■□□□□ 0.59
CSMD1Q96PZ7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSMD1Q96PZ7 AC083880.1-201ENST00000608266 535 ntBASIC18.75■□□□□ 0.59
CSMD1Q96PZ7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CSMD1Q96PZ7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.75■□□□□ 0.59
CSMD1Q96PZ7 AC022211.4-201ENST00000625094 2161 ntBASIC18.75■□□□□ 0.59
CSMD1Q96PZ7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.75■□□□□ 0.59
CSMD1Q96PZ7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.75■□□□□ 0.59
CSMD1Q96PZ7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.75■□□□□ 0.59
CSMD1Q96PZ7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.75■□□□□ 0.59
CSMD1Q96PZ7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms