Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
DUX3Q96PT4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.98■□□□□ 0.31
DUX3Q96PT4 AL162430.1-201ENST00000480705 870 ntBASIC16.98■□□□□ 0.31
DUX3Q96PT4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.98■□□□□ 0.31
DUX3Q96PT4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.98■□□□□ 0.31
DUX3Q96PT4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DUX3Q96PT4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
DUX3Q96PT4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC16.98■□□□□ 0.31
DUX3Q96PT4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUX3Q96PT4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUX3Q96PT4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DUX3Q96PT4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DUX3Q96PT4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUX3Q96PT4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
DUX3Q96PT4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUX3Q96PT4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
DUX3Q96PT4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUX3Q96PT4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.97■□□□□ 0.31
DUX3Q96PT4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.97■□□□□ 0.31
DUX3Q96PT4 MIR572-201ENST00000384983 95 ntBASIC16.97■□□□□ 0.31
DUX3Q96PT4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.97■□□□□ 0.31
DUX3Q96PT4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DUX3Q96PT4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.97■□□□□ 0.31
DUX3Q96PT4 AC104564.3-201ENST00000582367 638 ntBASIC16.97■□□□□ 0.31
DUX3Q96PT4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUX3Q96PT4 ANOS2P-203ENST00000472227 1816 ntBASIC16.97■□□□□ 0.31
DUX3Q96PT4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.97■□□□□ 0.31
DUX3Q96PT4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
DUX3Q96PT4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUX3Q96PT4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
DUX3Q96PT4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
DUX3Q96PT4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DUX3Q96PT4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
DUX3Q96PT4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DUX3Q96PT4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DUX3Q96PT4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.96■□□□□ 0.31
DUX3Q96PT4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.96■□□□□ 0.31
DUX3Q96PT4 AC012414.1-201ENST00000556676 535 ntBASIC16.96■□□□□ 0.31
DUX3Q96PT4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
DUX3Q96PT4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
DUX3Q96PT4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
DUX3Q96PT4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
DUX3Q96PT4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DUX3Q96PT4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
DUX3Q96PT4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.96■□□□□ 0.3
DUX3Q96PT4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
DUX3Q96PT4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.96■□□□□ 0.3
DUX3Q96PT4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
DUX3Q96PT4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
DUX3Q96PT4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
DUX3Q96PT4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DUX3Q96PT4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DUX3Q96PT4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DUX3Q96PT4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.95■□□□□ 0.3
DUX3Q96PT4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
DUX3Q96PT4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DUX3Q96PT4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DUX3Q96PT4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DUX3Q96PT4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
DUX3Q96PT4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
DUX3Q96PT4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DUX3Q96PT4 PKD1P6-201ENST00000343738 4769 ntBASIC16.94■□□□□ 0.3
DUX3Q96PT4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
DUX3Q96PT4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
DUX3Q96PT4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DUX3Q96PT4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.94■□□□□ 0.3
DUX3Q96PT4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.94■□□□□ 0.3
DUX3Q96PT4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.94■□□□□ 0.3
DUX3Q96PT4 AL358852.1-201ENST00000623174 1268 ntBASIC16.94■□□□□ 0.3
DUX3Q96PT4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.94■□□□□ 0.3
DUX3Q96PT4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.94■□□□□ 0.3
DUX3Q96PT4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DUX3Q96PT4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
DUX3Q96PT4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
DUX3Q96PT4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
DUX3Q96PT4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.93■□□□□ 0.3
DUX3Q96PT4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
DUX3Q96PT4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DUX3Q96PT4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DUX3Q96PT4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DUX3Q96PT4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
DUX3Q96PT4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DUX3Q96PT4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.93■□□□□ 0.3
DUX3Q96PT4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DUX3Q96PT4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DUX3Q96PT4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.93■□□□□ 0.3
DUX3Q96PT4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.93■□□□□ 0.3
DUX3Q96PT4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DUX3Q96PT4 YBX1P1-201ENST00000445822 960 ntBASIC16.93■□□□□ 0.3
DUX3Q96PT4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.93■□□□□ 0.3
DUX3Q96PT4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.93■□□□□ 0.3
DUX3Q96PT4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DUX3Q96PT4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DUX3Q96PT4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DUX3Q96PT4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.93■□□□□ 0.3
DUX3Q96PT4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.93■□□□□ 0.3
DUX3Q96PT4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC16.92■□□□□ 0.3
DUX3Q96PT4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DUX3Q96PT4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.92■□□□□ 0.3
DUX3Q96PT4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms