Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL21A1Q96P44 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL21A1Q96P44 FP325331.1-202ENST00000623531 1380 ntBASIC20.63■□□□□ 0.89
COL21A1Q96P44 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL21A1Q96P44 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.63■□□□□ 0.89
COL21A1Q96P44 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.63■□□□□ 0.89
COL21A1Q96P44 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.63■□□□□ 0.89
COL21A1Q96P44 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
COL21A1Q96P44 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.63■□□□□ 0.89
COL21A1Q96P44 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.63■□□□□ 0.89
COL21A1Q96P44 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL21A1Q96P44 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL21A1Q96P44 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.62■□□□□ 0.89
COL21A1Q96P44 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL21A1Q96P44 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
COL21A1Q96P44 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
COL21A1Q96P44 AC241377.3-202ENST00000626088 1088 ntBASIC20.62■□□□□ 0.89
COL21A1Q96P44 AC241585.3-202ENST00000628937 1088 ntBASIC20.62■□□□□ 0.89
COL21A1Q96P44 AC245100.8-202ENST00000629247 1058 ntBASIC20.62■□□□□ 0.89
COL21A1Q96P44 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL21A1Q96P44 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.62■□□□□ 0.89
COL21A1Q96P44 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL21A1Q96P44 AC242852.2-201ENST00000615738 1807 ntBASIC20.62■□□□□ 0.89
COL21A1Q96P44 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL21A1Q96P44 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL21A1Q96P44 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
COL21A1Q96P44 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
COL21A1Q96P44 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.61■□□□□ 0.89
COL21A1Q96P44 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL21A1Q96P44 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.61■□□□□ 0.89
COL21A1Q96P44 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL21A1Q96P44 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL21A1Q96P44 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL21A1Q96P44 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.61■□□□□ 0.89
COL21A1Q96P44 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
COL21A1Q96P44 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
COL21A1Q96P44 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL21A1Q96P44 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL21A1Q96P44 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL21A1Q96P44 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL21A1Q96P44 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
COL21A1Q96P44 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
COL21A1Q96P44 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.6■□□□□ 0.89
COL21A1Q96P44 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL21A1Q96P44 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL21A1Q96P44 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.6■□□□□ 0.89
COL21A1Q96P44 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.6■□□□□ 0.89
COL21A1Q96P44 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL21A1Q96P44 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL21A1Q96P44 LINC01529-204ENST00000636474 1715 ntBASIC20.59■□□□□ 0.89
COL21A1Q96P44 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.59■□□□□ 0.89
COL21A1Q96P44 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL21A1Q96P44 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL21A1Q96P44 AC099791.2-201ENST00000605725 427 ntBASIC20.59■□□□□ 0.89
COL21A1Q96P44 AC092171.4-201ENST00000609130 632 ntBASIC20.59■□□□□ 0.89
COL21A1Q96P44 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL21A1Q96P44 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
COL21A1Q96P44 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.59■□□□□ 0.89
COL21A1Q96P44 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
COL21A1Q96P44 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL21A1Q96P44 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
COL21A1Q96P44 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
COL21A1Q96P44 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
COL21A1Q96P44 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL21A1Q96P44 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL21A1Q96P44 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.59■□□□□ 0.89
COL21A1Q96P44 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL21A1Q96P44 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.59■□□□□ 0.89
COL21A1Q96P44 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
COL21A1Q96P44 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL21A1Q96P44 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL21A1Q96P44 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COL21A1Q96P44 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
COL21A1Q96P44 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.58■□□□□ 0.88
COL21A1Q96P44 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL21A1Q96P44 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL21A1Q96P44 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
COL21A1Q96P44 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL21A1Q96P44 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL21A1Q96P44 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.57■□□□□ 0.88
COL21A1Q96P44 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL21A1Q96P44 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.57■□□□□ 0.88
COL21A1Q96P44 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL21A1Q96P44 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL21A1Q96P44 AC009086.3-201ENST00000623486 1008 ntBASIC20.57■□□□□ 0.88
COL21A1Q96P44 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
COL21A1Q96P44 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL21A1Q96P44 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL21A1Q96P44 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.57■□□□□ 0.88
COL21A1Q96P44 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL21A1Q96P44 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL21A1Q96P44 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
COL21A1Q96P44 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
COL21A1Q96P44 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL21A1Q96P44 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL21A1Q96P44 DUX4L4-201ENST00000566884 1269 ntBASIC20.56■□□□□ 0.88
COL21A1Q96P44 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL21A1Q96P44 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.56■□□□□ 0.88
COL21A1Q96P44 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL21A1Q96P44 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms