Protein–RNA interactions for Protein: Q96A61

TRIM52, Tripartite motif-containing protein 52, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM52Q96A61 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC32.52■■■□□ 2.8
TRIM52Q96A61 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC32.51■■■□□ 2.8
TRIM52Q96A61 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC32.51■■■□□ 2.8
TRIM52Q96A61 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
TRIM52Q96A61 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC32.51■■■□□ 2.8
TRIM52Q96A61 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
TRIM52Q96A61 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC32.51■■■□□ 2.8
TRIM52Q96A61 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
TRIM52Q96A61 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC32.51■■■□□ 2.79
TRIM52Q96A61 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC32.51■■■□□ 2.79
TRIM52Q96A61 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC32.51■■■□□ 2.79
TRIM52Q96A61 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
TRIM52Q96A61 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
TRIM52Q96A61 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.79
TRIM52Q96A61 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC32.5■■■□□ 2.79
TRIM52Q96A61 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
TRIM52Q96A61 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
TRIM52Q96A61 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC32.5■■■□□ 2.79
TRIM52Q96A61 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
TRIM52Q96A61 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC32.49■■■□□ 2.79
TRIM52Q96A61 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC32.49■■■□□ 2.79
TRIM52Q96A61 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC32.49■■■□□ 2.79
TRIM52Q96A61 AC068587.7-201ENST00000641602 218 ntBASIC32.49■■■□□ 2.79
TRIM52Q96A61 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
TRIM52Q96A61 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC32.48■■■□□ 2.79
TRIM52Q96A61 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC32.48■■■□□ 2.79
TRIM52Q96A61 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC32.48■■■□□ 2.79
TRIM52Q96A61 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
TRIM52Q96A61 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC32.48■■■□□ 2.79
TRIM52Q96A61 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
TRIM52Q96A61 AC010141.3-201ENST00000456659 717 ntBASIC32.48■■■□□ 2.79
TRIM52Q96A61 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
TRIM52Q96A61 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC32.48■■■□□ 2.79
TRIM52Q96A61 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC32.47■■■□□ 2.79
TRIM52Q96A61 NT5C3AP1-201ENST00000394500 1012 ntBASIC32.47■■■□□ 2.79
TRIM52Q96A61 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC32.47■■■□□ 2.79
TRIM52Q96A61 AC034268.1-201ENST00000441047 882 ntBASIC32.47■■■□□ 2.79
TRIM52Q96A61 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC32.47■■■□□ 2.79
TRIM52Q96A61 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC32.47■■■□□ 2.79
TRIM52Q96A61 DUSP8P3-201ENST00000399571 1760 ntBASIC32.47■■■□□ 2.79
TRIM52Q96A61 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC32.47■■■□□ 2.79
TRIM52Q96A61 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
TRIM52Q96A61 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC32.46■■■□□ 2.79
TRIM52Q96A61 AC123595.1-201ENST00000440769 1046 ntBASIC32.46■■■□□ 2.79
TRIM52Q96A61 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC32.46■■■□□ 2.79
TRIM52Q96A61 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC32.46■■■□□ 2.79
TRIM52Q96A61 MPST-204ENST00000404393 1329 ntTSL 5 BASIC32.46■■■□□ 2.79
TRIM52Q96A61 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC32.46■■■□□ 2.79
TRIM52Q96A61 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC32.45■■■□□ 2.79
TRIM52Q96A61 USP45-205ENST00000472914 1617 ntTSL 5 BASIC32.45■■■□□ 2.79
TRIM52Q96A61 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
TRIM52Q96A61 DUX4L2-201ENST00000561772 1275 ntBASIC32.45■■■□□ 2.79
TRIM52Q96A61 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC32.45■■■□□ 2.79
TRIM52Q96A61 AC087239.1-201ENST00000622671 572 ntBASIC32.45■■■□□ 2.79
TRIM52Q96A61 DUX4L6-201ENST00000626483 1275 ntBASIC32.45■■■□□ 2.79
TRIM52Q96A61 DUX4L1-201ENST00000627662 1275 ntBASIC32.45■■■□□ 2.79
TRIM52Q96A61 DUX4L8-201ENST00000629013 1275 ntBASIC32.45■■■□□ 2.79
TRIM52Q96A61 DUX4L3-201ENST00000630187 1275 ntBASIC32.45■■■□□ 2.79
TRIM52Q96A61 DUX4L7-201ENST00000630678 1275 ntBASIC32.45■■■□□ 2.79
TRIM52Q96A61 DUX4L5-201ENST00000630834 1275 ntBASIC32.45■■■□□ 2.79
TRIM52Q96A61 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.79
TRIM52Q96A61 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC32.45■■■□□ 2.79
TRIM52Q96A61 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC32.44■■■□□ 2.78
TRIM52Q96A61 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
TRIM52Q96A61 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
TRIM52Q96A61 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
TRIM52Q96A61 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC32.44■■■□□ 2.78
TRIM52Q96A61 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
TRIM52Q96A61 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC32.44■■■□□ 2.78
TRIM52Q96A61 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
TRIM52Q96A61 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
TRIM52Q96A61 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
TRIM52Q96A61 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
TRIM52Q96A61 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC32.44■■■□□ 2.78
TRIM52Q96A61 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
TRIM52Q96A61 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
TRIM52Q96A61 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
TRIM52Q96A61 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
TRIM52Q96A61 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
TRIM52Q96A61 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
TRIM52Q96A61 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC32.43■■■□□ 2.78
TRIM52Q96A61 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
TRIM52Q96A61 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
TRIM52Q96A61 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC32.43■■■□□ 2.78
TRIM52Q96A61 CCDC92B-201ENST00000575506 885 ntBASIC32.43■■■□□ 2.78
TRIM52Q96A61 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
TRIM52Q96A61 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC32.42■■■□□ 2.78
TRIM52Q96A61 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
TRIM52Q96A61 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC32.42■■■□□ 2.78
TRIM52Q96A61 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC32.42■■■□□ 2.78
TRIM52Q96A61 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC32.42■■■□□ 2.78
TRIM52Q96A61 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC32.42■■■□□ 2.78
TRIM52Q96A61 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
TRIM52Q96A61 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC32.42■■■□□ 2.78
TRIM52Q96A61 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC32.41■■■□□ 2.78
TRIM52Q96A61 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC32.41■■■□□ 2.78
TRIM52Q96A61 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC32.41■■■□□ 2.78
TRIM52Q96A61 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC32.41■■■□□ 2.78
TRIM52Q96A61 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC32.41■■■□□ 2.78
TRIM52Q96A61 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC32.4■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms