Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 DUSP8P4-201ENST00000399538 1761 ntBASIC15.02□□□□□ -0.01
ALMS1Q8TCU4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ALMS1Q8TCU4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.02□□□□□ -0.01
ALMS1Q8TCU4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.02□□□□□ -0.01
ALMS1Q8TCU4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ALMS1Q8TCU4 SMUG1P1-201ENST00000590640 811 ntBASIC15.02□□□□□ -0.01
ALMS1Q8TCU4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.02□□□□□ -0.01
ALMS1Q8TCU4 AC083880.1-201ENST00000608266 535 ntBASIC15.02□□□□□ -0.01
ALMS1Q8TCU4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ALMS1Q8TCU4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.01□□□□□ -0.01
ALMS1Q8TCU4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ALMS1Q8TCU4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
ALMS1Q8TCU4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.01□□□□□ -0.01
ALMS1Q8TCU4 AC007322.4-201ENST00000509611 723 ntBASIC15.01□□□□□ -0.01
ALMS1Q8TCU4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC15.01□□□□□ -0.01
ALMS1Q8TCU4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
ALMS1Q8TCU4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ALMS1Q8TCU4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ALMS1Q8TCU4 DUSP5P2-201ENST00000426873 1033 ntBASIC15.01□□□□□ -0.01
ALMS1Q8TCU4 CYP2T1P-201ENST00000432607 1285 ntBASIC15.01□□□□□ -0.01
ALMS1Q8TCU4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ALMS1Q8TCU4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
ALMS1Q8TCU4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.01□□□□□ -0.01
ALMS1Q8TCU4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ALMS1Q8TCU4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC15.01□□□□□ -0.01
ALMS1Q8TCU4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC15□□□□□ -0.01
ALMS1Q8TCU4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ALMS1Q8TCU4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ALMS1Q8TCU4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ALMS1Q8TCU4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ALMS1Q8TCU4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15□□□□□ -0.01
ALMS1Q8TCU4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
ALMS1Q8TCU4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
ALMS1Q8TCU4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ALMS1Q8TCU4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ALMS1Q8TCU4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
ALMS1Q8TCU4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ALMS1Q8TCU4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
ALMS1Q8TCU4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ALMS1Q8TCU4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
ALMS1Q8TCU4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.99□□□□□ -0.01
ALMS1Q8TCU4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ALMS1Q8TCU4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC14.99□□□□□ -0.01
ALMS1Q8TCU4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
ALMS1Q8TCU4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ALMS1Q8TCU4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ALMS1Q8TCU4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
ALMS1Q8TCU4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ALMS1Q8TCU4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ALMS1Q8TCU4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ALMS1Q8TCU4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC14.99□□□□□ -0.01
ALMS1Q8TCU4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ALMS1Q8TCU4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ALMS1Q8TCU4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ALMS1Q8TCU4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.99□□□□□ -0.01
ALMS1Q8TCU4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
ALMS1Q8TCU4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC14.98□□□□□ -0.01
ALMS1Q8TCU4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ALMS1Q8TCU4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ALMS1Q8TCU4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ALMS1Q8TCU4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ALMS1Q8TCU4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
ALMS1Q8TCU4 MYC-209ENST00000641252 345 ntBASIC14.98□□□□□ -0.01
ALMS1Q8TCU4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.98□□□□□ -0.01
ALMS1Q8TCU4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ALMS1Q8TCU4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ALMS1Q8TCU4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ALMS1Q8TCU4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ALMS1Q8TCU4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.98□□□□□ -0.01
ALMS1Q8TCU4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ALMS1Q8TCU4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ALMS1Q8TCU4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
ALMS1Q8TCU4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC14.98□□□□□ -0.01
ALMS1Q8TCU4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.98□□□□□ -0.01
ALMS1Q8TCU4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ALMS1Q8TCU4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ALMS1Q8TCU4 MYCNOS-205ENST00000641950 531 ntBASIC14.97□□□□□ -0.01
ALMS1Q8TCU4 AC133041.1-202ENST00000642053 222 ntBASIC14.97□□□□□ -0.01
ALMS1Q8TCU4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
ALMS1Q8TCU4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ALMS1Q8TCU4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ALMS1Q8TCU4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC14.97□□□□□ -0.01
ALMS1Q8TCU4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.97□□□□□ -0.01
ALMS1Q8TCU4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ALMS1Q8TCU4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ALMS1Q8TCU4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ALMS1Q8TCU4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
ALMS1Q8TCU4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
ALMS1Q8TCU4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.96□□□□□ -0.01
ALMS1Q8TCU4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.96□□□□□ -0.01
ALMS1Q8TCU4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC14.96□□□□□ -0.01
ALMS1Q8TCU4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC14.96□□□□□ -0.01
ALMS1Q8TCU4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ALMS1Q8TCU4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.96□□□□□ -0.01
ALMS1Q8TCU4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ALMS1Q8TCU4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC14.96□□□□□ -0.01
ALMS1Q8TCU4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC14.96□□□□□ -0.01
ALMS1Q8TCU4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ALMS1Q8TCU4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ALMS1Q8TCU4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms