Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NUP43Q8NFH3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NUP43Q8NFH3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NUP43Q8NFH3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.5■□□□□ 0.87
NUP43Q8NFH3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NUP43Q8NFH3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NUP43Q8NFH3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.49■□□□□ 0.87
NUP43Q8NFH3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
NUP43Q8NFH3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.49■□□□□ 0.87
NUP43Q8NFH3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.49■□□□□ 0.87
NUP43Q8NFH3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.49■□□□□ 0.87
NUP43Q8NFH3 MIR3181-201ENST00000578512 73 ntBASIC20.49■□□□□ 0.87
NUP43Q8NFH3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.49■□□□□ 0.87
NUP43Q8NFH3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.49■□□□□ 0.87
NUP43Q8NFH3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NUP43Q8NFH3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NUP43Q8NFH3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
NUP43Q8NFH3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.49■□□□□ 0.87
NUP43Q8NFH3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
NUP43Q8NFH3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
NUP43Q8NFH3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NUP43Q8NFH3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NUP43Q8NFH3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
NUP43Q8NFH3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NUP43Q8NFH3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.48■□□□□ 0.87
NUP43Q8NFH3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NUP43Q8NFH3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NUP43Q8NFH3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NUP43Q8NFH3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.48■□□□□ 0.87
NUP43Q8NFH3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.48■□□□□ 0.87
NUP43Q8NFH3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NUP43Q8NFH3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.48■□□□□ 0.87
NUP43Q8NFH3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NUP43Q8NFH3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
NUP43Q8NFH3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.47■□□□□ 0.87
NUP43Q8NFH3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUP43Q8NFH3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUP43Q8NFH3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
NUP43Q8NFH3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NUP43Q8NFH3 AC139530.1-201ENST00000575312 1977 ntBASIC20.47■□□□□ 0.87
NUP43Q8NFH3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUP43Q8NFH3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.47■□□□□ 0.87
NUP43Q8NFH3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NUP43Q8NFH3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.47■□□□□ 0.87
NUP43Q8NFH3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
NUP43Q8NFH3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUP43Q8NFH3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUP43Q8NFH3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUP43Q8NFH3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUP43Q8NFH3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUP43Q8NFH3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NUP43Q8NFH3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUP43Q8NFH3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.47■□□□□ 0.87
NUP43Q8NFH3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NUP43Q8NFH3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NUP43Q8NFH3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
NUP43Q8NFH3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.46■□□□□ 0.87
NUP43Q8NFH3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NUP43Q8NFH3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NUP43Q8NFH3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NUP43Q8NFH3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NUP43Q8NFH3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NUP43Q8NFH3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NUP43Q8NFH3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NUP43Q8NFH3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NUP43Q8NFH3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
NUP43Q8NFH3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
NUP43Q8NFH3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.45■□□□□ 0.86
NUP43Q8NFH3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
NUP43Q8NFH3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.45■□□□□ 0.86
NUP43Q8NFH3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.45■□□□□ 0.86
NUP43Q8NFH3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NUP43Q8NFH3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.45■□□□□ 0.86
NUP43Q8NFH3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
NUP43Q8NFH3 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.45■□□□□ 0.86
NUP43Q8NFH3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.45■□□□□ 0.86
NUP43Q8NFH3 AC131212.1-201ENST00000613771 668 ntBASIC20.45■□□□□ 0.86
NUP43Q8NFH3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.45■□□□□ 0.86
NUP43Q8NFH3 SYT6-210ENST00000641643 1587 ntBASIC20.45■□□□□ 0.86
NUP43Q8NFH3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NUP43Q8NFH3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NUP43Q8NFH3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.44■□□□□ 0.86
NUP43Q8NFH3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NUP43Q8NFH3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUP43Q8NFH3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUP43Q8NFH3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.44■□□□□ 0.86
NUP43Q8NFH3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUP43Q8NFH3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUP43Q8NFH3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NUP43Q8NFH3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.44■□□□□ 0.86
NUP43Q8NFH3 DUX4L19-201ENST00000557448 1267 ntBASIC20.44■□□□□ 0.86
NUP43Q8NFH3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.44■□□□□ 0.86
NUP43Q8NFH3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUP43Q8NFH3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
NUP43Q8NFH3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUP43Q8NFH3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUP43Q8NFH3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUP43Q8NFH3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NUP43Q8NFH3 AC092053.2-201ENST00000640557 1818 ntBASIC20.43■□□□□ 0.86
NUP43Q8NFH3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms