Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.14■□□□□ 0.65
CPEB3Q8NE35 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CPEB3Q8NE35 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CPEB3Q8NE35 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.14■□□□□ 0.65
CPEB3Q8NE35 AC110285.6-201ENST00000617652 491 ntBASIC19.14■□□□□ 0.65
CPEB3Q8NE35 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPEB3Q8NE35 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPEB3Q8NE35 AC135279.3-201ENST00000610945 1311 ntBASIC19.14■□□□□ 0.65
CPEB3Q8NE35 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPEB3Q8NE35 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPEB3Q8NE35 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPEB3Q8NE35 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CPEB3Q8NE35 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPEB3Q8NE35 LINC01960-201ENST00000563759 1884 ntBASIC19.14■□□□□ 0.65
CPEB3Q8NE35 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPEB3Q8NE35 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPEB3Q8NE35 MIR4767-201ENST00000582827 78 ntBASIC19.13■□□□□ 0.65
CPEB3Q8NE35 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.13■□□□□ 0.65
CPEB3Q8NE35 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CPEB3Q8NE35 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPEB3Q8NE35 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPEB3Q8NE35 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
CPEB3Q8NE35 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.13■□□□□ 0.65
CPEB3Q8NE35 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CPEB3Q8NE35 AC233723.2-201ENST00000623798 2106 ntBASIC19.13■□□□□ 0.65
CPEB3Q8NE35 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPEB3Q8NE35 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPEB3Q8NE35 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPEB3Q8NE35 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPEB3Q8NE35 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPEB3Q8NE35 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CPEB3Q8NE35 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.12■□□□□ 0.65
CPEB3Q8NE35 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.12■□□□□ 0.65
CPEB3Q8NE35 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.12■□□□□ 0.65
CPEB3Q8NE35 PBX2P1-201ENST00000493219 1291 ntBASIC19.12■□□□□ 0.65
CPEB3Q8NE35 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.12■□□□□ 0.65
CPEB3Q8NE35 AC010525.1-201ENST00000585559 441 ntBASIC19.12■□□□□ 0.65
CPEB3Q8NE35 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPEB3Q8NE35 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CPEB3Q8NE35 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPEB3Q8NE35 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.11■□□□□ 0.65
CPEB3Q8NE35 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPEB3Q8NE35 OR2I1P-207ENST00000453522 948 ntBASIC19.11■□□□□ 0.65
CPEB3Q8NE35 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CPEB3Q8NE35 AC106739.1-201ENST00000617035 715 ntBASIC19.11■□□□□ 0.65
CPEB3Q8NE35 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPEB3Q8NE35 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPEB3Q8NE35 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPEB3Q8NE35 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPEB3Q8NE35 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CPEB3Q8NE35 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CPEB3Q8NE35 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.1■□□□□ 0.65
CPEB3Q8NE35 ESRRAP2-201ENST00000418437 1549 ntBASIC19.1■□□□□ 0.65
CPEB3Q8NE35 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPEB3Q8NE35 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPEB3Q8NE35 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPEB3Q8NE35 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPEB3Q8NE35 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPEB3Q8NE35 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CPEB3Q8NE35 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CPEB3Q8NE35 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
CPEB3Q8NE35 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.1■□□□□ 0.65
CPEB3Q8NE35 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.1■□□□□ 0.65
CPEB3Q8NE35 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.1■□□□□ 0.65
CPEB3Q8NE35 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPEB3Q8NE35 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPEB3Q8NE35 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CPEB3Q8NE35 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPEB3Q8NE35 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.1■□□□□ 0.65
CPEB3Q8NE35 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CPEB3Q8NE35 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPEB3Q8NE35 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPEB3Q8NE35 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPEB3Q8NE35 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPEB3Q8NE35 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.09■□□□□ 0.65
CPEB3Q8NE35 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPEB3Q8NE35 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CPEB3Q8NE35 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.09■□□□□ 0.65
CPEB3Q8NE35 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.09■□□□□ 0.65
CPEB3Q8NE35 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPEB3Q8NE35 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPEB3Q8NE35 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPEB3Q8NE35 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPEB3Q8NE35 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.08■□□□□ 0.65
CPEB3Q8NE35 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CPEB3Q8NE35 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CPEB3Q8NE35 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPEB3Q8NE35 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CPEB3Q8NE35 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPEB3Q8NE35 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CPEB3Q8NE35 SLC47A1P1-202ENST00000449666 945 ntBASIC19.08■□□□□ 0.64
CPEB3Q8NE35 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.08■□□□□ 0.64
CPEB3Q8NE35 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.08■□□□□ 0.64
CPEB3Q8NE35 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CPEB3Q8NE35 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.08■□□□□ 0.64
CPEB3Q8NE35 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.08■□□□□ 0.64
CPEB3Q8NE35 AL139246.5-201ENST00000606645 996 ntBASIC19.08■□□□□ 0.64
CPEB3Q8NE35 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.08■□□□□ 0.64
CPEB3Q8NE35 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.08■□□□□ 0.64
CPEB3Q8NE35 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms