Protein–RNA interactions for Protein: Q8NDW8

TTC21A, Tetratricopeptide repeat protein 21A, humanhuman

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC21AQ8NDW8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
TTC21AQ8NDW8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC29.86■■■□□ 2.37
TTC21AQ8NDW8 CDCA4P2-201ENST00000441182 718 ntBASIC29.86■■■□□ 2.37
TTC21AQ8NDW8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC29.86■■■□□ 2.37
TTC21AQ8NDW8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
TTC21AQ8NDW8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC29.85■■■□□ 2.37
TTC21AQ8NDW8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC29.85■■■□□ 2.37
TTC21AQ8NDW8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
TTC21AQ8NDW8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
TTC21AQ8NDW8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC29.85■■■□□ 2.37
TTC21AQ8NDW8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC29.85■■■□□ 2.37
TTC21AQ8NDW8 ABCB10P4-201ENST00000566803 2184 ntBASIC29.84■■■□□ 2.37
TTC21AQ8NDW8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
TTC21AQ8NDW8 KRT19P1-201ENST00000405746 1186 ntBASIC29.84■■■□□ 2.37
TTC21AQ8NDW8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC29.84■■■□□ 2.37
TTC21AQ8NDW8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC29.84■■■□□ 2.37
TTC21AQ8NDW8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC29.84■■■□□ 2.37
TTC21AQ8NDW8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC29.84■■■□□ 2.37
TTC21AQ8NDW8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
TTC21AQ8NDW8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC29.84■■■□□ 2.37
TTC21AQ8NDW8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
TTC21AQ8NDW8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
TTC21AQ8NDW8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
TTC21AQ8NDW8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
TTC21AQ8NDW8 HLA-L-209ENST00000420110 1011 ntBASIC29.83■■■□□ 2.37
TTC21AQ8NDW8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
TTC21AQ8NDW8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC29.83■■■□□ 2.37
TTC21AQ8NDW8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
TTC21AQ8NDW8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC29.82■■■□□ 2.36
TTC21AQ8NDW8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC29.82■■■□□ 2.36
TTC21AQ8NDW8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
TTC21AQ8NDW8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC29.81■■■□□ 2.36
TTC21AQ8NDW8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC29.81■■■□□ 2.36
TTC21AQ8NDW8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
TTC21AQ8NDW8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
TTC21AQ8NDW8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
TTC21AQ8NDW8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC29.81■■■□□ 2.36
TTC21AQ8NDW8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC29.81■■■□□ 2.36
TTC21AQ8NDW8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC29.81■■■□□ 2.36
TTC21AQ8NDW8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC29.81■■■□□ 2.36
TTC21AQ8NDW8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC29.81■■■□□ 2.36
TTC21AQ8NDW8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
TTC21AQ8NDW8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
TTC21AQ8NDW8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC29.8■■■□□ 2.36
TTC21AQ8NDW8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TTC21AQ8NDW8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TTC21AQ8NDW8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC29.8■■■□□ 2.36
TTC21AQ8NDW8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC29.8■■■□□ 2.36
TTC21AQ8NDW8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC29.8■■■□□ 2.36
TTC21AQ8NDW8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
TTC21AQ8NDW8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TTC21AQ8NDW8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TTC21AQ8NDW8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TTC21AQ8NDW8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
TTC21AQ8NDW8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
TTC21AQ8NDW8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC29.79■■■□□ 2.36
TTC21AQ8NDW8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC29.79■■■□□ 2.36
TTC21AQ8NDW8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
TTC21AQ8NDW8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC29.79■■■□□ 2.36
TTC21AQ8NDW8 BID-214ENST00000617586 542 ntTSL 5 BASIC29.79■■■□□ 2.36
TTC21AQ8NDW8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC29.79■■■□□ 2.36
TTC21AQ8NDW8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
TTC21AQ8NDW8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
TTC21AQ8NDW8 DUSP8P3-201ENST00000399571 1760 ntBASIC29.78■■■□□ 2.36
TTC21AQ8NDW8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
TTC21AQ8NDW8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
TTC21AQ8NDW8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC29.78■■■□□ 2.36
TTC21AQ8NDW8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
TTC21AQ8NDW8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
TTC21AQ8NDW8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
TTC21AQ8NDW8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
TTC21AQ8NDW8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
TTC21AQ8NDW8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC29.77■■■□□ 2.36
TTC21AQ8NDW8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.36
TTC21AQ8NDW8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
TTC21AQ8NDW8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
TTC21AQ8NDW8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
TTC21AQ8NDW8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.36
TTC21AQ8NDW8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
TTC21AQ8NDW8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC29.76■■■□□ 2.36
TTC21AQ8NDW8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
TTC21AQ8NDW8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC29.76■■■□□ 2.36
TTC21AQ8NDW8 AC079140.4-201ENST00000507448 529 ntBASIC29.76■■■□□ 2.36
TTC21AQ8NDW8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC29.76■■■□□ 2.36
TTC21AQ8NDW8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
TTC21AQ8NDW8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC29.76■■■□□ 2.35
TTC21AQ8NDW8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
TTC21AQ8NDW8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC29.76■■■□□ 2.35
TTC21AQ8NDW8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
TTC21AQ8NDW8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC29.76■■■□□ 2.35
TTC21AQ8NDW8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
TTC21AQ8NDW8 AC026185.1-201ENST00000445748 174 ntBASIC29.75■■■□□ 2.35
TTC21AQ8NDW8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
TTC21AQ8NDW8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
TTC21AQ8NDW8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC29.74■■■□□ 2.35
TTC21AQ8NDW8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
TTC21AQ8NDW8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC29.74■■■□□ 2.35
TTC21AQ8NDW8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
TTC21AQ8NDW8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC29.74■■■□□ 2.35
TTC21AQ8NDW8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms