Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF439Q8NDP4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF439Q8NDP4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
ZNF439Q8NDP4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF439Q8NDP4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF439Q8NDP4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF439Q8NDP4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
ZNF439Q8NDP4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.08■□□□□ 0.48
ZNF439Q8NDP4 AL499627.2-201ENST00000606283 725 ntBASIC18.08■□□□□ 0.48
ZNF439Q8NDP4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF439Q8NDP4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF439Q8NDP4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF439Q8NDP4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF439Q8NDP4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF439Q8NDP4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF439Q8NDP4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 AC087742.1-201ENST00000575880 1738 ntBASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 AC241377.3-202ENST00000626088 1088 ntBASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 AC241585.3-202ENST00000628937 1088 ntBASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 AC245100.8-202ENST00000629247 1058 ntBASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF439Q8NDP4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF439Q8NDP4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF439Q8NDP4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF439Q8NDP4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF439Q8NDP4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF439Q8NDP4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.06■□□□□ 0.48
ZNF439Q8NDP4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF439Q8NDP4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ZNF439Q8NDP4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.06■□□□□ 0.48
ZNF439Q8NDP4 AL512631.2-201ENST00000604634 923 ntBASIC18.06■□□□□ 0.48
ZNF439Q8NDP4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.06■□□□□ 0.48
ZNF439Q8NDP4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF439Q8NDP4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.06■□□□□ 0.48
ZNF439Q8NDP4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF439Q8NDP4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF439Q8NDP4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ZNF439Q8NDP4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNF439Q8NDP4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF439Q8NDP4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNF439Q8NDP4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.05■□□□□ 0.48
ZNF439Q8NDP4 ECEL1P1-201ENST00000373592 1742 ntBASIC18.05■□□□□ 0.48
ZNF439Q8NDP4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF439Q8NDP4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF439Q8NDP4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF439Q8NDP4 AC004687.1-201ENST00000579003 1625 ntBASIC18.05■□□□□ 0.48
ZNF439Q8NDP4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF439Q8NDP4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF439Q8NDP4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF439Q8NDP4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF439Q8NDP4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF439Q8NDP4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF439Q8NDP4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF439Q8NDP4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.04■□□□□ 0.48
ZNF439Q8NDP4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.04■□□□□ 0.48
ZNF439Q8NDP4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.04■□□□□ 0.48
ZNF439Q8NDP4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF439Q8NDP4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.04■□□□□ 0.48
ZNF439Q8NDP4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF439Q8NDP4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
ZNF439Q8NDP4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF439Q8NDP4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF439Q8NDP4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF439Q8NDP4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF439Q8NDP4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ZNF439Q8NDP4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF439Q8NDP4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF439Q8NDP4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF439Q8NDP4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
ZNF439Q8NDP4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF439Q8NDP4 AC006455.2-201ENST00000429931 906 ntBASIC18.03■□□□□ 0.48
ZNF439Q8NDP4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF439Q8NDP4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.03■□□□□ 0.48
ZNF439Q8NDP4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF439Q8NDP4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF439Q8NDP4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF439Q8NDP4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF439Q8NDP4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF439Q8NDP4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF439Q8NDP4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF439Q8NDP4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ZNF439Q8NDP4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF439Q8NDP4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms