Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.37■■□□□ 1.01
CPSF7Q8N684 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.37■■□□□ 1.01
CPSF7Q8N684 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPSF7Q8N684 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.37■■□□□ 1.01
CPSF7Q8N684 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.37■■□□□ 1.01
CPSF7Q8N684 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.37■■□□□ 1.01
CPSF7Q8N684 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CPSF7Q8N684 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPSF7Q8N684 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CPSF7Q8N684 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPSF7Q8N684 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.36■■□□□ 1.01
CPSF7Q8N684 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CPSF7Q8N684 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.36■■□□□ 1.01
CPSF7Q8N684 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.36■■□□□ 1.01
CPSF7Q8N684 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPSF7Q8N684 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.36■■□□□ 1.01
CPSF7Q8N684 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CPSF7Q8N684 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.36■■□□□ 1.01
CPSF7Q8N684 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPSF7Q8N684 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.36■■□□□ 1.01
CPSF7Q8N684 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPSF7Q8N684 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPSF7Q8N684 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPSF7Q8N684 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CPSF7Q8N684 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPSF7Q8N684 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
CPSF7Q8N684 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.35■■□□□ 1.01
CPSF7Q8N684 AC010997.5-201ENST00000609182 354 ntBASIC21.35■■□□□ 1.01
CPSF7Q8N684 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.35■■□□□ 1.01
CPSF7Q8N684 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CPSF7Q8N684 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.35■■□□□ 1.01
CPSF7Q8N684 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPSF7Q8N684 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CPSF7Q8N684 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPSF7Q8N684 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPSF7Q8N684 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.35■■□□□ 1.01
CPSF7Q8N684 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPSF7Q8N684 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPSF7Q8N684 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.35■■□□□ 1.01
CPSF7Q8N684 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CPSF7Q8N684 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.34■■□□□ 1.01
CPSF7Q8N684 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPSF7Q8N684 MTDHP2-201ENST00000601468 714 ntBASIC21.34■■□□□ 1.01
CPSF7Q8N684 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPSF7Q8N684 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CPSF7Q8N684 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CPSF7Q8N684 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPSF7Q8N684 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CPSF7Q8N684 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPSF7Q8N684 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.33■■□□□ 1.01
CPSF7Q8N684 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPSF7Q8N684 AC144652.1-201ENST00000609974 1624 ntBASIC21.33■■□□□ 1.01
CPSF7Q8N684 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.33■■□□□ 1.01
CPSF7Q8N684 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPSF7Q8N684 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.33■■□□□ 1.01
CPSF7Q8N684 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CPSF7Q8N684 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
CPSF7Q8N684 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.33■■□□□ 1
CPSF7Q8N684 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CPSF7Q8N684 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CPSF7Q8N684 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.32■■□□□ 1
CPSF7Q8N684 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CPSF7Q8N684 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CPSF7Q8N684 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPSF7Q8N684 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPSF7Q8N684 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPSF7Q8N684 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.32■■□□□ 1
CPSF7Q8N684 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CPSF7Q8N684 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.32■■□□□ 1
CPSF7Q8N684 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPSF7Q8N684 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPSF7Q8N684 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPSF7Q8N684 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPSF7Q8N684 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CPSF7Q8N684 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.31■■□□□ 1
CPSF7Q8N684 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.31■■□□□ 1
CPSF7Q8N684 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CPSF7Q8N684 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPSF7Q8N684 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.31■■□□□ 1
CPSF7Q8N684 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CPSF7Q8N684 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.31■■□□□ 1
CPSF7Q8N684 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.31■■□□□ 1
CPSF7Q8N684 AC010542.4-201ENST00000563151 1910 ntBASIC21.31■■□□□ 1
CPSF7Q8N684 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.31■■□□□ 1
CPSF7Q8N684 AC019069.1-201ENST00000610008 1333 ntBASIC21.3■■□□□ 1
CPSF7Q8N684 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CPSF7Q8N684 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPSF7Q8N684 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPSF7Q8N684 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPSF7Q8N684 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPSF7Q8N684 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
CPSF7Q8N684 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.3■■□□□ 1
CPSF7Q8N684 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.3■■□□□ 1
CPSF7Q8N684 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.3■■□□□ 1
CPSF7Q8N684 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.3■■□□□ 1
CPSF7Q8N684 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.3■■□□□ 1
CPSF7Q8N684 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CPSF7Q8N684 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CPSF7Q8N684 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.3■■□□□ 1
CPSF7Q8N684 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms