Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHPFQ8IZ52 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
CHPFQ8IZ52 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHPFQ8IZ52 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHPFQ8IZ52 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHPFQ8IZ52 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.35■■□□□ 1.17
CHPFQ8IZ52 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CHPFQ8IZ52 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHPFQ8IZ52 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHPFQ8IZ52 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHPFQ8IZ52 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHPFQ8IZ52 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHPFQ8IZ52 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CHPFQ8IZ52 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CHPFQ8IZ52 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.35■■□□□ 1.17
CHPFQ8IZ52 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.35■■□□□ 1.17
CHPFQ8IZ52 AC092437.1-201ENST00000624794 1048 ntBASIC22.35■■□□□ 1.17
CHPFQ8IZ52 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CHPFQ8IZ52 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHPFQ8IZ52 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.34■■□□□ 1.17
CHPFQ8IZ52 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHPFQ8IZ52 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.34■■□□□ 1.17
CHPFQ8IZ52 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHPFQ8IZ52 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHPFQ8IZ52 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
CHPFQ8IZ52 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CHPFQ8IZ52 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.34■■□□□ 1.17
CHPFQ8IZ52 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.34■■□□□ 1.17
CHPFQ8IZ52 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
CHPFQ8IZ52 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.34■■□□□ 1.17
CHPFQ8IZ52 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.34■■□□□ 1.17
CHPFQ8IZ52 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CHPFQ8IZ52 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHPFQ8IZ52 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.34■■□□□ 1.17
CHPFQ8IZ52 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.33■■□□□ 1.17
CHPFQ8IZ52 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHPFQ8IZ52 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.33■■□□□ 1.17
CHPFQ8IZ52 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
CHPFQ8IZ52 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHPFQ8IZ52 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHPFQ8IZ52 AC004911.1-201ENST00000416316 871 ntBASIC22.33■■□□□ 1.17
CHPFQ8IZ52 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.33■■□□□ 1.17
CHPFQ8IZ52 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.33■■□□□ 1.17
CHPFQ8IZ52 AC068587.7-201ENST00000641602 218 ntBASIC22.33■■□□□ 1.17
CHPFQ8IZ52 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CHPFQ8IZ52 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.16
CHPFQ8IZ52 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.32■■□□□ 1.16
CHPFQ8IZ52 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CHPFQ8IZ52 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.32■■□□□ 1.16
CHPFQ8IZ52 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHPFQ8IZ52 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CHPFQ8IZ52 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHPFQ8IZ52 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHPFQ8IZ52 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHPFQ8IZ52 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.31■■□□□ 1.16
CHPFQ8IZ52 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHPFQ8IZ52 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHPFQ8IZ52 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CHPFQ8IZ52 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CHPFQ8IZ52 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHPFQ8IZ52 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.31■■□□□ 1.16
CHPFQ8IZ52 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.31■■□□□ 1.16
CHPFQ8IZ52 AC087239.1-201ENST00000622671 572 ntBASIC22.31■■□□□ 1.16
CHPFQ8IZ52 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.31■■□□□ 1.16
CHPFQ8IZ52 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHPFQ8IZ52 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CHPFQ8IZ52 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CHPFQ8IZ52 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CHPFQ8IZ52 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHPFQ8IZ52 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHPFQ8IZ52 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CHPFQ8IZ52 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CHPFQ8IZ52 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHPFQ8IZ52 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.29■■□□□ 1.16
CHPFQ8IZ52 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHPFQ8IZ52 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.29■■□□□ 1.16
CHPFQ8IZ52 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHPFQ8IZ52 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CHPFQ8IZ52 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.29■■□□□ 1.16
CHPFQ8IZ52 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHPFQ8IZ52 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CHPFQ8IZ52 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHPFQ8IZ52 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.28■■□□□ 1.16
CHPFQ8IZ52 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
CHPFQ8IZ52 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHPFQ8IZ52 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CHPFQ8IZ52 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHPFQ8IZ52 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CHPFQ8IZ52 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.28■■□□□ 1.16
CHPFQ8IZ52 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CHPFQ8IZ52 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHPFQ8IZ52 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CHPFQ8IZ52 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHPFQ8IZ52 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CHPFQ8IZ52 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHPFQ8IZ52 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
CHPFQ8IZ52 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHPFQ8IZ52 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.27■■□□□ 1.16
CHPFQ8IZ52 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.27■■□□□ 1.16
CHPFQ8IZ52 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms