Protein–RNA interactions for Protein: Q86YC2

PALB2, Partner and localizer of BRCA2, humanhuman

Predictions only

Length 1,186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2Q86YC2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PALB2Q86YC2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PALB2Q86YC2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PALB2Q86YC2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.83■■□□□ 1.41
PALB2Q86YC2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PALB2Q86YC2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PALB2Q86YC2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.83■■□□□ 1.41
PALB2Q86YC2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.83■■□□□ 1.41
PALB2Q86YC2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.83■■□□□ 1.41
PALB2Q86YC2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PALB2Q86YC2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.83■■□□□ 1.4
PALB2Q86YC2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
PALB2Q86YC2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PALB2Q86YC2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.82■■□□□ 1.4
PALB2Q86YC2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PALB2Q86YC2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
PALB2Q86YC2 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.82■■□□□ 1.4
PALB2Q86YC2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PALB2Q86YC2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.82■■□□□ 1.4
PALB2Q86YC2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PALB2Q86YC2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.82■■□□□ 1.4
PALB2Q86YC2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
PALB2Q86YC2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.82■■□□□ 1.4
PALB2Q86YC2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
PALB2Q86YC2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
PALB2Q86YC2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PALB2Q86YC2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.81■■□□□ 1.4
PALB2Q86YC2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.81■■□□□ 1.4
PALB2Q86YC2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PALB2Q86YC2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
PALB2Q86YC2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.81■■□□□ 1.4
PALB2Q86YC2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.81■■□□□ 1.4
PALB2Q86YC2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.81■■□□□ 1.4
PALB2Q86YC2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.81■■□□□ 1.4
PALB2Q86YC2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
PALB2Q86YC2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
PALB2Q86YC2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.81■■□□□ 1.4
PALB2Q86YC2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.81■■□□□ 1.4
PALB2Q86YC2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PALB2Q86YC2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.8■■□□□ 1.4
PALB2Q86YC2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PALB2Q86YC2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PALB2Q86YC2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PALB2Q86YC2 EP400NL-214ENST00000641289 2402 ntBASIC23.8■■□□□ 1.4
PALB2Q86YC2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PALB2Q86YC2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PALB2Q86YC2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PALB2Q86YC2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PALB2Q86YC2 AL117328.2-201ENST00000624617 1940 ntBASIC23.8■■□□□ 1.4
PALB2Q86YC2 AC144652.1-201ENST00000609974 1624 ntBASIC23.8■■□□□ 1.4
PALB2Q86YC2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.8■■□□□ 1.4
PALB2Q86YC2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PALB2Q86YC2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.79■■□□□ 1.4
PALB2Q86YC2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.79■■□□□ 1.4
PALB2Q86YC2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PALB2Q86YC2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.79■■□□□ 1.4
PALB2Q86YC2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PALB2Q86YC2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.79■■□□□ 1.4
PALB2Q86YC2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
PALB2Q86YC2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
PALB2Q86YC2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
PALB2Q86YC2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
PALB2Q86YC2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
PALB2Q86YC2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PALB2Q86YC2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.78■■□□□ 1.4
PALB2Q86YC2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PALB2Q86YC2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PALB2Q86YC2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PALB2Q86YC2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PALB2Q86YC2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.78■■□□□ 1.4
PALB2Q86YC2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PALB2Q86YC2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PALB2Q86YC2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PALB2Q86YC2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.77■■□□□ 1.4
PALB2Q86YC2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.77■■□□□ 1.4
PALB2Q86YC2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PALB2Q86YC2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PALB2Q86YC2 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.77■■□□□ 1.4
PALB2Q86YC2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.77■■□□□ 1.4
PALB2Q86YC2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.77■■□□□ 1.4
PALB2Q86YC2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PALB2Q86YC2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PALB2Q86YC2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PALB2Q86YC2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.76■■□□□ 1.39
PALB2Q86YC2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PALB2Q86YC2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.76■■□□□ 1.39
PALB2Q86YC2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PALB2Q86YC2 AC133637.1-201ENST00000624115 1537 ntBASIC23.76■■□□□ 1.39
PALB2Q86YC2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PALB2Q86YC2 AC079834.2-201ENST00000609776 1949 ntBASIC23.76■■□□□ 1.39
PALB2Q86YC2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
PALB2Q86YC2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
PALB2Q86YC2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.75■■□□□ 1.39
PALB2Q86YC2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.75■■□□□ 1.39
PALB2Q86YC2 AC034268.1-201ENST00000441047 882 ntBASIC23.75■■□□□ 1.39
PALB2Q86YC2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.75■■□□□ 1.39
PALB2Q86YC2 AL031602.1-201ENST00000633169 911 ntBASIC23.75■■□□□ 1.39
PALB2Q86YC2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PALB2Q86YC2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
PALB2Q86YC2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms