Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRTM1Q86UE6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRTM1Q86UE6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRTM1Q86UE6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRTM1Q86UE6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.99■□□□□ 0.63
LRRTM1Q86UE6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRTM1Q86UE6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRTM1Q86UE6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRTM1Q86UE6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRTM1Q86UE6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRTM1Q86UE6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRTM1Q86UE6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRTM1Q86UE6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRTM1Q86UE6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRTM1Q86UE6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.98■□□□□ 0.63
LRRTM1Q86UE6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRTM1Q86UE6 AC005229.4-201ENST00000610085 2198 ntBASIC18.98■□□□□ 0.63
LRRTM1Q86UE6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRTM1Q86UE6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRTM1Q86UE6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRTM1Q86UE6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRTM1Q86UE6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRTM1Q86UE6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.97■□□□□ 0.63
LRRTM1Q86UE6 AC004987.1-201ENST00000428627 508 ntBASIC18.97■□□□□ 0.63
LRRTM1Q86UE6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
LRRTM1Q86UE6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.97■□□□□ 0.63
LRRTM1Q86UE6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRTM1Q86UE6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRTM1Q86UE6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRTM1Q86UE6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRTM1Q86UE6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRTM1Q86UE6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRTM1Q86UE6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 ATP5G2P3-201ENST00000429083 425 ntBASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 AC009086.3-201ENST00000623486 1008 ntBASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRTM1Q86UE6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.95■□□□□ 0.62
LRRTM1Q86UE6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.95■□□□□ 0.62
LRRTM1Q86UE6 AC244015.2-201ENST00000616358 1861 ntBASIC18.95■□□□□ 0.62
LRRTM1Q86UE6 DUX4L4-201ENST00000566884 1269 ntBASIC18.95■□□□□ 0.62
LRRTM1Q86UE6 ABHD17AP5-201ENST00000580133 923 ntBASIC18.95■□□□□ 0.62
LRRTM1Q86UE6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
LRRTM1Q86UE6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRTM1Q86UE6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRTM1Q86UE6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.95■□□□□ 0.62
LRRTM1Q86UE6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.95■□□□□ 0.62
LRRTM1Q86UE6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRTM1Q86UE6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRTM1Q86UE6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRRTM1Q86UE6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LRRTM1Q86UE6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRTM1Q86UE6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.95■□□□□ 0.62
LRRTM1Q86UE6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.94■□□□□ 0.62
LRRTM1Q86UE6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.94■□□□□ 0.62
LRRTM1Q86UE6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LRRTM1Q86UE6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.94■□□□□ 0.62
LRRTM1Q86UE6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.94■□□□□ 0.62
LRRTM1Q86UE6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRTM1Q86UE6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.94■□□□□ 0.62
LRRTM1Q86UE6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.94■□□□□ 0.62
LRRTM1Q86UE6 CA15P2-201ENST00000611168 834 ntBASIC18.94■□□□□ 0.62
LRRTM1Q86UE6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LRRTM1Q86UE6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRTM1Q86UE6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
LRRTM1Q86UE6 PKD1P6-201ENST00000343738 4769 ntBASIC18.94■□□□□ 0.62
LRRTM1Q86UE6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRTM1Q86UE6 SLC25A24-204ENST00000569674 2357 ntBASIC18.93■□□□□ 0.62
LRRTM1Q86UE6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM1Q86UE6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM1Q86UE6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM1Q86UE6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM1Q86UE6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM1Q86UE6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.93■□□□□ 0.62
LRRTM1Q86UE6 MIR4508-201ENST00000584178 70 ntBASIC18.93■□□□□ 0.62
LRRTM1Q86UE6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.93■□□□□ 0.62
LRRTM1Q86UE6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM1Q86UE6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.93■□□□□ 0.62
LRRTM1Q86UE6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM1Q86UE6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.93■□□□□ 0.62
LRRTM1Q86UE6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms