Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RGPD4Q7Z3J3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC28.35■■■□□ 2.13
RGPD4Q7Z3J3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RGPD4Q7Z3J3 AC083880.1-201ENST00000608266 535 ntBASIC28.35■■■□□ 2.13
RGPD4Q7Z3J3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RGPD4Q7Z3J3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RGPD4Q7Z3J3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RGPD4Q7Z3J3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
RGPD4Q7Z3J3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RGPD4Q7Z3J3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC28.34■■■□□ 2.13
RGPD4Q7Z3J3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
RGPD4Q7Z3J3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC28.34■■■□□ 2.13
RGPD4Q7Z3J3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
RGPD4Q7Z3J3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
RGPD4Q7Z3J3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RGPD4Q7Z3J3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
RGPD4Q7Z3J3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
RGPD4Q7Z3J3 AP006294.2-201ENST00000641667 209 ntBASIC28.34■■■□□ 2.13
RGPD4Q7Z3J3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
RGPD4Q7Z3J3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.33■■■□□ 2.13
RGPD4Q7Z3J3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RGPD4Q7Z3J3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
RGPD4Q7Z3J3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
RGPD4Q7Z3J3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.33■■■□□ 2.13
RGPD4Q7Z3J3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
RGPD4Q7Z3J3 LINC01529-204ENST00000636474 1715 ntBASIC28.32■■■□□ 2.12
RGPD4Q7Z3J3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
RGPD4Q7Z3J3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RGPD4Q7Z3J3 AL596275.1-201ENST00000423464 877 ntBASIC28.32■■■□□ 2.12
RGPD4Q7Z3J3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC28.32■■■□□ 2.12
RGPD4Q7Z3J3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC28.32■■■□□ 2.12
RGPD4Q7Z3J3 MIR4758-201ENST00000577688 71 ntBASIC28.32■■■□□ 2.12
RGPD4Q7Z3J3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
RGPD4Q7Z3J3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RGPD4Q7Z3J3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RGPD4Q7Z3J3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RGPD4Q7Z3J3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC28.32■■■□□ 2.12
RGPD4Q7Z3J3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC28.32■■■□□ 2.12
RGPD4Q7Z3J3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC28.32■■■□□ 2.12
RGPD4Q7Z3J3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC28.32■■■□□ 2.12
RGPD4Q7Z3J3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
RGPD4Q7Z3J3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
RGPD4Q7Z3J3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
RGPD4Q7Z3J3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.31■■■□□ 2.12
RGPD4Q7Z3J3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC28.31■■■□□ 2.12
RGPD4Q7Z3J3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
RGPD4Q7Z3J3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC28.31■■■□□ 2.12
RGPD4Q7Z3J3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC28.31■■■□□ 2.12
RGPD4Q7Z3J3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC28.31■■■□□ 2.12
RGPD4Q7Z3J3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC28.31■■■□□ 2.12
RGPD4Q7Z3J3 PPP1R14BP2-201ENST00000426284 444 ntBASIC28.31■■■□□ 2.12
RGPD4Q7Z3J3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC28.31■■■□□ 2.12
RGPD4Q7Z3J3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC28.31■■■□□ 2.12
RGPD4Q7Z3J3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
RGPD4Q7Z3J3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC28.3■■■□□ 2.12
RGPD4Q7Z3J3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
RGPD4Q7Z3J3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
RGPD4Q7Z3J3 AC010141.3-201ENST00000456659 717 ntBASIC28.3■■■□□ 2.12
RGPD4Q7Z3J3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
RGPD4Q7Z3J3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC28.3■■■□□ 2.12
RGPD4Q7Z3J3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
RGPD4Q7Z3J3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
RGPD4Q7Z3J3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC28.3■■■□□ 2.12
RGPD4Q7Z3J3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
RGPD4Q7Z3J3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC28.29■■■□□ 2.12
RGPD4Q7Z3J3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
RGPD4Q7Z3J3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC28.29■■■□□ 2.12
RGPD4Q7Z3J3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
RGPD4Q7Z3J3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC28.29■■■□□ 2.12
RGPD4Q7Z3J3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
RGPD4Q7Z3J3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
RGPD4Q7Z3J3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
RGPD4Q7Z3J3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC28.29■■■□□ 2.12
RGPD4Q7Z3J3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC28.29■■■□□ 2.12
RGPD4Q7Z3J3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
RGPD4Q7Z3J3 AC010536.3-201ENST00000620306 533 ntBASIC28.29■■■□□ 2.12
RGPD4Q7Z3J3 AC013268.1-206ENST00000638368 961 ntBASIC28.29■■■□□ 2.12
RGPD4Q7Z3J3 AC112229.1-201ENST00000639295 961 ntBASIC28.29■■■□□ 2.12
RGPD4Q7Z3J3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
RGPD4Q7Z3J3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RGPD4Q7Z3J3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC28.28■■■□□ 2.12
RGPD4Q7Z3J3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RGPD4Q7Z3J3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC28.28■■■□□ 2.12
RGPD4Q7Z3J3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC28.28■■■□□ 2.12
RGPD4Q7Z3J3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC28.28■■■□□ 2.12
RGPD4Q7Z3J3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RGPD4Q7Z3J3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RGPD4Q7Z3J3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
RGPD4Q7Z3J3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
RGPD4Q7Z3J3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC28.27■■■□□ 2.12
RGPD4Q7Z3J3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC28.27■■■□□ 2.12
RGPD4Q7Z3J3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC28.27■■■□□ 2.12
RGPD4Q7Z3J3 AC092118.2-201ENST00000613495 667 ntBASIC28.27■■■□□ 2.12
RGPD4Q7Z3J3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
RGPD4Q7Z3J3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
RGPD4Q7Z3J3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
RGPD4Q7Z3J3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
RGPD4Q7Z3J3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC28.27■■■□□ 2.12
RGPD4Q7Z3J3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC28.27■■■□□ 2.12
RGPD4Q7Z3J3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms