Protein–RNA interactions for Protein: Q6ZSJ9

SHISA6, Protein shisa-6 homolog, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA6Q6ZSJ9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SHISA6Q6ZSJ9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SHISA6Q6ZSJ9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SHISA6Q6ZSJ9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.6■□□□□ 0.89
SHISA6Q6ZSJ9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.6■□□□□ 0.89
SHISA6Q6ZSJ9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.6■□□□□ 0.89
SHISA6Q6ZSJ9 AC104564.3-201ENST00000582367 638 ntBASIC20.6■□□□□ 0.89
SHISA6Q6ZSJ9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHISA6Q6ZSJ9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SHISA6Q6ZSJ9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHISA6Q6ZSJ9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.6■□□□□ 0.89
SHISA6Q6ZSJ9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHISA6Q6ZSJ9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SHISA6Q6ZSJ9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHISA6Q6ZSJ9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SHISA6Q6ZSJ9 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.59■□□□□ 0.89
SHISA6Q6ZSJ9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SHISA6Q6ZSJ9 AC027612.3-201ENST00000413684 1047 ntBASIC20.59■□□□□ 0.89
SHISA6Q6ZSJ9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.59■□□□□ 0.89
SHISA6Q6ZSJ9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.59■□□□□ 0.89
SHISA6Q6ZSJ9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.59■□□□□ 0.89
SHISA6Q6ZSJ9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.59■□□□□ 0.89
SHISA6Q6ZSJ9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHISA6Q6ZSJ9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SHISA6Q6ZSJ9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHISA6Q6ZSJ9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHISA6Q6ZSJ9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHISA6Q6ZSJ9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHISA6Q6ZSJ9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.58■□□□□ 0.89
SHISA6Q6ZSJ9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SHISA6Q6ZSJ9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHISA6Q6ZSJ9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHISA6Q6ZSJ9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.58■□□□□ 0.89
SHISA6Q6ZSJ9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SHISA6Q6ZSJ9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SHISA6Q6ZSJ9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.58■□□□□ 0.89
SHISA6Q6ZSJ9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.58■□□□□ 0.89
SHISA6Q6ZSJ9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.58■□□□□ 0.89
SHISA6Q6ZSJ9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SHISA6Q6ZSJ9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHISA6Q6ZSJ9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.57■□□□□ 0.88
SHISA6Q6ZSJ9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHISA6Q6ZSJ9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SHISA6Q6ZSJ9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SHISA6Q6ZSJ9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.57■□□□□ 0.88
SHISA6Q6ZSJ9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.57■□□□□ 0.88
SHISA6Q6ZSJ9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHISA6Q6ZSJ9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.57■□□□□ 0.88
SHISA6Q6ZSJ9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHISA6Q6ZSJ9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.57■□□□□ 0.88
SHISA6Q6ZSJ9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHISA6Q6ZSJ9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHISA6Q6ZSJ9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.56■□□□□ 0.88
SHISA6Q6ZSJ9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHISA6Q6ZSJ9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHISA6Q6ZSJ9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SHISA6Q6ZSJ9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.56■□□□□ 0.88
SHISA6Q6ZSJ9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.56■□□□□ 0.88
SHISA6Q6ZSJ9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SHISA6Q6ZSJ9 AC034268.1-201ENST00000441047 882 ntBASIC20.56■□□□□ 0.88
SHISA6Q6ZSJ9 DUX4L2-201ENST00000561772 1275 ntBASIC20.56■□□□□ 0.88
SHISA6Q6ZSJ9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.56■□□□□ 0.88
SHISA6Q6ZSJ9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
SHISA6Q6ZSJ9 DUX4L6-201ENST00000626483 1275 ntBASIC20.56■□□□□ 0.88
SHISA6Q6ZSJ9 DUX4L1-201ENST00000627662 1275 ntBASIC20.56■□□□□ 0.88
SHISA6Q6ZSJ9 DUX4L8-201ENST00000629013 1275 ntBASIC20.56■□□□□ 0.88
SHISA6Q6ZSJ9 DUX4L3-201ENST00000630187 1275 ntBASIC20.56■□□□□ 0.88
SHISA6Q6ZSJ9 DUX4L7-201ENST00000630678 1275 ntBASIC20.56■□□□□ 0.88
SHISA6Q6ZSJ9 DUX4L5-201ENST00000630834 1275 ntBASIC20.56■□□□□ 0.88
SHISA6Q6ZSJ9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SHISA6Q6ZSJ9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.56■□□□□ 0.88
SHISA6Q6ZSJ9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.56■□□□□ 0.88
SHISA6Q6ZSJ9 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHISA6Q6ZSJ9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.55■□□□□ 0.88
SHISA6Q6ZSJ9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SHISA6Q6ZSJ9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHISA6Q6ZSJ9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHISA6Q6ZSJ9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHISA6Q6ZSJ9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHISA6Q6ZSJ9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHISA6Q6ZSJ9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHISA6Q6ZSJ9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHISA6Q6ZSJ9 AC010141.3-201ENST00000456659 717 ntBASIC20.55■□□□□ 0.88
SHISA6Q6ZSJ9 CCDC92B-201ENST00000575506 885 ntBASIC20.55■□□□□ 0.88
SHISA6Q6ZSJ9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHISA6Q6ZSJ9 AC087239.1-201ENST00000622671 572 ntBASIC20.55■□□□□ 0.88
SHISA6Q6ZSJ9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHISA6Q6ZSJ9 DUSP8P3-201ENST00000399571 1760 ntBASIC20.54■□□□□ 0.88
SHISA6Q6ZSJ9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHISA6Q6ZSJ9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SHISA6Q6ZSJ9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.54■□□□□ 0.88
SHISA6Q6ZSJ9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SHISA6Q6ZSJ9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.54■□□□□ 0.88
SHISA6Q6ZSJ9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SHISA6Q6ZSJ9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHISA6Q6ZSJ9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHISA6Q6ZSJ9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHISA6Q6ZSJ9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SHISA6Q6ZSJ9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.53■□□□□ 0.88
SHISA6Q6ZSJ9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms