Protein–RNA interactions for Protein: Q68CZ1

RPGRIP1L, Protein fantom, humanhuman

Predictions only

Length 1,315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1LQ68CZ1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.62
RPGRIP1LQ68CZ1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
RPGRIP1LQ68CZ1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RPGRIP1LQ68CZ1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RPGRIP1LQ68CZ1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
RPGRIP1LQ68CZ1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC31.44■■■□□ 2.62
RPGRIP1LQ68CZ1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC31.44■■■□□ 2.62
RPGRIP1LQ68CZ1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC31.44■■■□□ 2.62
RPGRIP1LQ68CZ1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
RPGRIP1LQ68CZ1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC31.43■■■□□ 2.62
RPGRIP1LQ68CZ1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
RPGRIP1LQ68CZ1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC31.43■■■□□ 2.62
RPGRIP1LQ68CZ1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC31.43■■■□□ 2.62
RPGRIP1LQ68CZ1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
RPGRIP1LQ68CZ1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RPGRIP1LQ68CZ1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
RPGRIP1LQ68CZ1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RPGRIP1LQ68CZ1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC31.42■■■□□ 2.62
RPGRIP1LQ68CZ1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC31.42■■■□□ 2.62
RPGRIP1LQ68CZ1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
RPGRIP1LQ68CZ1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
RPGRIP1LQ68CZ1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
RPGRIP1LQ68CZ1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
RPGRIP1LQ68CZ1 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
RPGRIP1LQ68CZ1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC31.41■■■□□ 2.62
RPGRIP1LQ68CZ1 HLA-L-209ENST00000420110 1011 ntBASIC31.41■■■□□ 2.62
RPGRIP1LQ68CZ1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC31.41■■■□□ 2.62
RPGRIP1LQ68CZ1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC31.4■■■□□ 2.62
RPGRIP1LQ68CZ1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
RPGRIP1LQ68CZ1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC31.4■■■□□ 2.62
RPGRIP1LQ68CZ1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC31.4■■■□□ 2.62
RPGRIP1LQ68CZ1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC31.4■■■□□ 2.62
RPGRIP1LQ68CZ1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
RPGRIP1LQ68CZ1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC31.39■■■□□ 2.62
RPGRIP1LQ68CZ1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
RPGRIP1LQ68CZ1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC31.39■■■□□ 2.62
RPGRIP1LQ68CZ1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
RPGRIP1LQ68CZ1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC31.39■■■□□ 2.62
RPGRIP1LQ68CZ1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC31.39■■■□□ 2.62
RPGRIP1LQ68CZ1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC31.39■■■□□ 2.62
RPGRIP1LQ68CZ1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC31.39■■■□□ 2.62
RPGRIP1LQ68CZ1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
RPGRIP1LQ68CZ1 DUSP8P3-201ENST00000399571 1760 ntBASIC31.38■■■□□ 2.61
RPGRIP1LQ68CZ1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
RPGRIP1LQ68CZ1 BID-214ENST00000617586 542 ntTSL 5 BASIC31.38■■■□□ 2.61
RPGRIP1LQ68CZ1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
RPGRIP1LQ68CZ1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
RPGRIP1LQ68CZ1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
RPGRIP1LQ68CZ1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC31.37■■■□□ 2.61
RPGRIP1LQ68CZ1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
RPGRIP1LQ68CZ1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
RPGRIP1LQ68CZ1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC31.37■■■□□ 2.61
RPGRIP1LQ68CZ1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
RPGRIP1LQ68CZ1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
RPGRIP1LQ68CZ1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
RPGRIP1LQ68CZ1 AC026185.1-201ENST00000445748 174 ntBASIC31.36■■■□□ 2.61
RPGRIP1LQ68CZ1 ABCB10P4-201ENST00000566803 2184 ntBASIC31.36■■■□□ 2.61
RPGRIP1LQ68CZ1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
RPGRIP1LQ68CZ1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC31.36■■■□□ 2.61
RPGRIP1LQ68CZ1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC31.35■■■□□ 2.61
RPGRIP1LQ68CZ1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
RPGRIP1LQ68CZ1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC31.35■■■□□ 2.61
RPGRIP1LQ68CZ1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
RPGRIP1LQ68CZ1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
RPGRIP1LQ68CZ1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
RPGRIP1LQ68CZ1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
RPGRIP1LQ68CZ1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
RPGRIP1LQ68CZ1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
RPGRIP1LQ68CZ1 KRT18P11-201ENST00000435214 1283 ntBASIC31.34■■■□□ 2.61
RPGRIP1LQ68CZ1 AC079140.4-201ENST00000507448 529 ntBASIC31.34■■■□□ 2.61
RPGRIP1LQ68CZ1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC31.34■■■□□ 2.61
RPGRIP1LQ68CZ1 TESC-206ENST00000541210 936 ntTSL 3 BASIC31.34■■■□□ 2.61
RPGRIP1LQ68CZ1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC31.34■■■□□ 2.61
RPGRIP1LQ68CZ1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC31.33■■■□□ 2.61
RPGRIP1LQ68CZ1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC31.33■■■□□ 2.61
RPGRIP1LQ68CZ1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
RPGRIP1LQ68CZ1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
RPGRIP1LQ68CZ1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC31.33■■■□□ 2.61
RPGRIP1LQ68CZ1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC31.33■■■□□ 2.61
RPGRIP1LQ68CZ1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
RPGRIP1LQ68CZ1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC31.33■■■□□ 2.61
RPGRIP1LQ68CZ1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
RPGRIP1LQ68CZ1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
RPGRIP1LQ68CZ1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
RPGRIP1LQ68CZ1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
RPGRIP1LQ68CZ1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
RPGRIP1LQ68CZ1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RPGRIP1LQ68CZ1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
RPGRIP1LQ68CZ1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC31.32■■■□□ 2.6
RPGRIP1LQ68CZ1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC31.32■■■□□ 2.6
RPGRIP1LQ68CZ1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC31.32■■■□□ 2.6
RPGRIP1LQ68CZ1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RPGRIP1LQ68CZ1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC31.32■■■□□ 2.6
RPGRIP1LQ68CZ1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
RPGRIP1LQ68CZ1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC31.32■■■□□ 2.6
RPGRIP1LQ68CZ1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RPGRIP1LQ68CZ1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RPGRIP1LQ68CZ1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
RPGRIP1LQ68CZ1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
RPGRIP1LQ68CZ1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms