Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
LPCAT4Q643R3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LPCAT4Q643R3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LPCAT4Q643R3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.64■□□□□ 0.89
LPCAT4Q643R3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LPCAT4Q643R3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LPCAT4Q643R3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
LPCAT4Q643R3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LPCAT4Q643R3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
LPCAT4Q643R3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LPCAT4Q643R3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
LPCAT4Q643R3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.63■□□□□ 0.89
LPCAT4Q643R3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.63■□□□□ 0.89
LPCAT4Q643R3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LPCAT4Q643R3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LPCAT4Q643R3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LPCAT4Q643R3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LPCAT4Q643R3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.62■□□□□ 0.89
LPCAT4Q643R3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.62■□□□□ 0.89
LPCAT4Q643R3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LPCAT4Q643R3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LPCAT4Q643R3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LPCAT4Q643R3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LPCAT4Q643R3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.62■□□□□ 0.89
LPCAT4Q643R3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LPCAT4Q643R3 MIR3648-2-201ENST00000581792 180 ntBASIC20.62■□□□□ 0.89
LPCAT4Q643R3 AC026202.3-201ENST00000600805 1127 ntBASIC20.62■□□□□ 0.89
LPCAT4Q643R3 RAP2CP1-202ENST00000605179 643 ntBASIC20.62■□□□□ 0.89
LPCAT4Q643R3 MIR3648-1-201ENST00000615959 180 ntBASIC20.62■□□□□ 0.89
LPCAT4Q643R3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.62■□□□□ 0.89
LPCAT4Q643R3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LPCAT4Q643R3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LPCAT4Q643R3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LPCAT4Q643R3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.62■□□□□ 0.89
LPCAT4Q643R3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LPCAT4Q643R3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LPCAT4Q643R3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LPCAT4Q643R3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LPCAT4Q643R3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.61■□□□□ 0.89
LPCAT4Q643R3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LPCAT4Q643R3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LPCAT4Q643R3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.61■□□□□ 0.89
LPCAT4Q643R3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LPCAT4Q643R3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LPCAT4Q643R3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.61■□□□□ 0.89
LPCAT4Q643R3 FEM1AP4-201ENST00000443167 1987 ntBASIC20.61■□□□□ 0.89
LPCAT4Q643R3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
LPCAT4Q643R3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.61■□□□□ 0.89
LPCAT4Q643R3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LPCAT4Q643R3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LPCAT4Q643R3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LPCAT4Q643R3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LPCAT4Q643R3 Z98882.1-201ENST00000622160 2253 ntBASIC20.6■□□□□ 0.89
LPCAT4Q643R3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LPCAT4Q643R3 ABHD17AP4-201ENST00000411545 909 ntBASIC20.6■□□□□ 0.89
LPCAT4Q643R3 ECEL1P2-201ENST00000461596 1295 ntBASIC20.6■□□□□ 0.89
LPCAT4Q643R3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LPCAT4Q643R3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LPCAT4Q643R3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
LPCAT4Q643R3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LPCAT4Q643R3 LINC01006-201ENST00000333319 2292 ntBASIC20.6■□□□□ 0.89
LPCAT4Q643R3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LPCAT4Q643R3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LPCAT4Q643R3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LPCAT4Q643R3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LPCAT4Q643R3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LPCAT4Q643R3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LPCAT4Q643R3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LPCAT4Q643R3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.59■□□□□ 0.89
LPCAT4Q643R3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LPCAT4Q643R3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LPCAT4Q643R3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LPCAT4Q643R3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LPCAT4Q643R3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LPCAT4Q643R3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LPCAT4Q643R3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LPCAT4Q643R3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.58■□□□□ 0.89
LPCAT4Q643R3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LPCAT4Q643R3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.58■□□□□ 0.89
LPCAT4Q643R3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LPCAT4Q643R3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.58■□□□□ 0.89
LPCAT4Q643R3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
LPCAT4Q643R3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.58■□□□□ 0.88
LPCAT4Q643R3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.58■□□□□ 0.88
LPCAT4Q643R3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LPCAT4Q643R3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LPCAT4Q643R3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LPCAT4Q643R3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LPCAT4Q643R3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
LPCAT4Q643R3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LPCAT4Q643R3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LPCAT4Q643R3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LPCAT4Q643R3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.57■□□□□ 0.88
LPCAT4Q643R3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.57■□□□□ 0.88
LPCAT4Q643R3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.57■□□□□ 0.88
LPCAT4Q643R3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.57■□□□□ 0.88
LPCAT4Q643R3 AC016575.1-201ENST00000607026 382 ntBASIC20.57■□□□□ 0.88
LPCAT4Q643R3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.57■□□□□ 0.88
LPCAT4Q643R3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.57■□□□□ 0.88
LPCAT4Q643R3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms