Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 YBX1P4-201ENST00000392794 808 ntBASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 MIR4508-201ENST00000584178 70 ntBASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH2D4BQ5SQS7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH2D4BQ5SQS7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.61■■□□□ 1.05
SH2D4BQ5SQS7 AC087742.1-201ENST00000575880 1738 ntBASIC21.61■■□□□ 1.05
SH2D4BQ5SQS7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.61■■□□□ 1.05
SH2D4BQ5SQS7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SH2D4BQ5SQS7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.61■■□□□ 1.05
SH2D4BQ5SQS7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH2D4BQ5SQS7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
SH2D4BQ5SQS7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
SH2D4BQ5SQS7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH2D4BQ5SQS7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SH2D4BQ5SQS7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SH2D4BQ5SQS7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SH2D4BQ5SQS7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SH2D4BQ5SQS7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SH2D4BQ5SQS7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SH2D4BQ5SQS7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.6■■□□□ 1.05
SH2D4BQ5SQS7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.6■■□□□ 1.05
SH2D4BQ5SQS7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.6■■□□□ 1.05
SH2D4BQ5SQS7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SH2D4BQ5SQS7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.6■■□□□ 1.05
SH2D4BQ5SQS7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SH2D4BQ5SQS7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH2D4BQ5SQS7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH2D4BQ5SQS7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH2D4BQ5SQS7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH2D4BQ5SQS7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH2D4BQ5SQS7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SH2D4BQ5SQS7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SH2D4BQ5SQS7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
SH2D4BQ5SQS7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH2D4BQ5SQS7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.05
SH2D4BQ5SQS7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SH2D4BQ5SQS7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SH2D4BQ5SQS7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SH2D4BQ5SQS7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SH2D4BQ5SQS7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SH2D4BQ5SQS7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SH2D4BQ5SQS7 AC103834.1-201ENST00000520383 144 ntBASIC21.58■■□□□ 1.05
SH2D4BQ5SQS7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.58■■□□□ 1.05
SH2D4BQ5SQS7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
SH2D4BQ5SQS7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
SH2D4BQ5SQS7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SH2D4BQ5SQS7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SH2D4BQ5SQS7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SH2D4BQ5SQS7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
SH2D4BQ5SQS7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SH2D4BQ5SQS7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH2D4BQ5SQS7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SH2D4BQ5SQS7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.57■■□□□ 1.04
SH2D4BQ5SQS7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.57■■□□□ 1.04
SH2D4BQ5SQS7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.57■■□□□ 1.04
SH2D4BQ5SQS7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SH2D4BQ5SQS7 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.57■■□□□ 1.04
SH2D4BQ5SQS7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH2D4BQ5SQS7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH2D4BQ5SQS7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SH2D4BQ5SQS7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.57■■□□□ 1.04
SH2D4BQ5SQS7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH2D4BQ5SQS7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SH2D4BQ5SQS7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH2D4BQ5SQS7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH2D4BQ5SQS7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SH2D4BQ5SQS7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.56■■□□□ 1.04
SH2D4BQ5SQS7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH2D4BQ5SQS7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.56■■□□□ 1.04
SH2D4BQ5SQS7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.56■■□□□ 1.04
SH2D4BQ5SQS7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SH2D4BQ5SQS7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH2D4BQ5SQS7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.55■■□□□ 1.04
SH2D4BQ5SQS7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH2D4BQ5SQS7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.55■■□□□ 1.04
SH2D4BQ5SQS7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.55■■□□□ 1.04
SH2D4BQ5SQS7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH2D4BQ5SQS7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.54■■□□□ 1.04
SH2D4BQ5SQS7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.54■■□□□ 1.04
SH2D4BQ5SQS7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH2D4BQ5SQS7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SH2D4BQ5SQS7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH2D4BQ5SQS7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SH2D4BQ5SQS7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH2D4BQ5SQS7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH2D4BQ5SQS7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH2D4BQ5SQS7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms