Protein–RNA interactions for Protein: Q5RKV6

EXOSC6, Exosome complex component MTR3, humanhuman

Known RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC6Q5RKV6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EXOSC6Q5RKV6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EXOSC6Q5RKV6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EXOSC6Q5RKV6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
EXOSC6Q5RKV6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
EXOSC6Q5RKV6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
EXOSC6Q5RKV6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
EXOSC6Q5RKV6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
EXOSC6Q5RKV6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
EXOSC6Q5RKV6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
EXOSC6Q5RKV6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.33■□□□□ 0.85
EXOSC6Q5RKV6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
EXOSC6Q5RKV6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.33■□□□□ 0.85
EXOSC6Q5RKV6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.33■□□□□ 0.85
EXOSC6Q5RKV6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.33■□□□□ 0.85
EXOSC6Q5RKV6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.33■□□□□ 0.85
EXOSC6Q5RKV6 DUX4L19-201ENST00000557448 1267 ntBASIC20.33■□□□□ 0.85
EXOSC6Q5RKV6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.33■□□□□ 0.85
EXOSC6Q5RKV6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
EXOSC6Q5RKV6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EXOSC6Q5RKV6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EXOSC6Q5RKV6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
EXOSC6Q5RKV6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
EXOSC6Q5RKV6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EXOSC6Q5RKV6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
EXOSC6Q5RKV6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EXOSC6Q5RKV6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.33■□□□□ 0.84
EXOSC6Q5RKV6 EP400NL-214ENST00000641289 2402 ntBASIC20.33■□□□□ 0.84
EXOSC6Q5RKV6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
EXOSC6Q5RKV6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.32■□□□□ 0.84
EXOSC6Q5RKV6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
EXOSC6Q5RKV6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
EXOSC6Q5RKV6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EXOSC6Q5RKV6 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.32■□□□□ 0.84
EXOSC6Q5RKV6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EXOSC6Q5RKV6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EXOSC6Q5RKV6 AC011298.3-201ENST00000615796 283 ntBASIC20.32■□□□□ 0.84
EXOSC6Q5RKV6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
EXOSC6Q5RKV6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EXOSC6Q5RKV6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EXOSC6Q5RKV6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EXOSC6Q5RKV6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
EXOSC6Q5RKV6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EXOSC6Q5RKV6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
EXOSC6Q5RKV6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
EXOSC6Q5RKV6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.31■□□□□ 0.84
EXOSC6Q5RKV6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EXOSC6Q5RKV6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EXOSC6Q5RKV6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.31■□□□□ 0.84
EXOSC6Q5RKV6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EXOSC6Q5RKV6 SYT6-210ENST00000641643 1587 ntBASIC20.31■□□□□ 0.84
EXOSC6Q5RKV6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.31■□□□□ 0.84
EXOSC6Q5RKV6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EXOSC6Q5RKV6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.31■□□□□ 0.84
EXOSC6Q5RKV6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.31■□□□□ 0.84
EXOSC6Q5RKV6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
EXOSC6Q5RKV6 AC136469.2-201ENST00000623944 1028 ntBASIC20.31■□□□□ 0.84
EXOSC6Q5RKV6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.31■□□□□ 0.84
EXOSC6Q5RKV6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EXOSC6Q5RKV6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.31■□□□□ 0.84
EXOSC6Q5RKV6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.31■□□□□ 0.84
EXOSC6Q5RKV6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EXOSC6Q5RKV6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
EXOSC6Q5RKV6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
EXOSC6Q5RKV6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
EXOSC6Q5RKV6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.3■□□□□ 0.84
EXOSC6Q5RKV6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EXOSC6Q5RKV6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
EXOSC6Q5RKV6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EXOSC6Q5RKV6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.3■□□□□ 0.84
EXOSC6Q5RKV6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EXOSC6Q5RKV6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EXOSC6Q5RKV6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EXOSC6Q5RKV6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
EXOSC6Q5RKV6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXOSC6Q5RKV6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EXOSC6Q5RKV6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
EXOSC6Q5RKV6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXOSC6Q5RKV6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.29■□□□□ 0.84
EXOSC6Q5RKV6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXOSC6Q5RKV6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXOSC6Q5RKV6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXOSC6Q5RKV6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.29■□□□□ 0.84
EXOSC6Q5RKV6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXOSC6Q5RKV6 AL136116.3-201ENST00000402907 1138 ntBASIC20.29■□□□□ 0.84
EXOSC6Q5RKV6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
EXOSC6Q5RKV6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.29■□□□□ 0.84
EXOSC6Q5RKV6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EXOSC6Q5RKV6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXOSC6Q5RKV6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
EXOSC6Q5RKV6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EXOSC6Q5RKV6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EXOSC6Q5RKV6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
EXOSC6Q5RKV6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EXOSC6Q5RKV6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
EXOSC6Q5RKV6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EXOSC6Q5RKV6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.28■□□□□ 0.84
EXOSC6Q5RKV6 AC010525.1-201ENST00000585559 441 ntBASIC20.28■□□□□ 0.84
EXOSC6Q5RKV6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EXOSC6Q5RKV6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms