Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
CTSL3PQ5NE16 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTSL3PQ5NE16 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CTSL3PQ5NE16 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
CTSL3PQ5NE16 AC137767.1-201ENST00000602918 1920 ntBASIC21.65■■□□□ 1.06
CTSL3PQ5NE16 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CTSL3PQ5NE16 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.65■■□□□ 1.06
CTSL3PQ5NE16 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTSL3PQ5NE16 OR2I1P-207ENST00000453522 948 ntBASIC21.65■■□□□ 1.06
CTSL3PQ5NE16 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.65■■□□□ 1.06
CTSL3PQ5NE16 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.65■■□□□ 1.06
CTSL3PQ5NE16 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTSL3PQ5NE16 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTSL3PQ5NE16 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CTSL3PQ5NE16 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTSL3PQ5NE16 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTSL3PQ5NE16 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.64■■□□□ 1.06
CTSL3PQ5NE16 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CTSL3PQ5NE16 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTSL3PQ5NE16 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.64■■□□□ 1.05
CTSL3PQ5NE16 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTSL3PQ5NE16 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.64■■□□□ 1.05
CTSL3PQ5NE16 AC010525.1-201ENST00000585559 441 ntBASIC21.64■■□□□ 1.05
CTSL3PQ5NE16 CA15P2-201ENST00000611168 834 ntBASIC21.64■■□□□ 1.05
CTSL3PQ5NE16 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
CTSL3PQ5NE16 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTSL3PQ5NE16 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CTSL3PQ5NE16 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTSL3PQ5NE16 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTSL3PQ5NE16 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
CTSL3PQ5NE16 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTSL3PQ5NE16 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTSL3PQ5NE16 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTSL3PQ5NE16 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTSL3PQ5NE16 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.63■■□□□ 1.05
CTSL3PQ5NE16 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
CTSL3PQ5NE16 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.63■■□□□ 1.05
CTSL3PQ5NE16 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.63■■□□□ 1.05
CTSL3PQ5NE16 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CTSL3PQ5NE16 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTSL3PQ5NE16 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.63■■□□□ 1.05
CTSL3PQ5NE16 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.63■■□□□ 1.05
CTSL3PQ5NE16 AC011298.3-201ENST00000615796 283 ntBASIC21.63■■□□□ 1.05
CTSL3PQ5NE16 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.63■■□□□ 1.05
CTSL3PQ5NE16 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTSL3PQ5NE16 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTSL3PQ5NE16 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTSL3PQ5NE16 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.63■■□□□ 1.05
CTSL3PQ5NE16 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CTSL3PQ5NE16 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CTSL3PQ5NE16 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTSL3PQ5NE16 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTSL3PQ5NE16 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTSL3PQ5NE16 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTSL3PQ5NE16 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTSL3PQ5NE16 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
CTSL3PQ5NE16 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTSL3PQ5NE16 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTSL3PQ5NE16 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.62■■□□□ 1.05
CTSL3PQ5NE16 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTSL3PQ5NE16 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.62■■□□□ 1.05
CTSL3PQ5NE16 AC136469.2-201ENST00000623944 1028 ntBASIC21.62■■□□□ 1.05
CTSL3PQ5NE16 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTSL3PQ5NE16 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTSL3PQ5NE16 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTSL3PQ5NE16 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CTSL3PQ5NE16 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTSL3PQ5NE16 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTSL3PQ5NE16 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTSL3PQ5NE16 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.61■■□□□ 1.05
CTSL3PQ5NE16 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTSL3PQ5NE16 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTSL3PQ5NE16 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTSL3PQ5NE16 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTSL3PQ5NE16 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTSL3PQ5NE16 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTSL3PQ5NE16 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTSL3PQ5NE16 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTSL3PQ5NE16 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTSL3PQ5NE16 AC008406.3-201ENST00000620001 1374 ntBASIC21.61■■□□□ 1.05
CTSL3PQ5NE16 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.6■■□□□ 1.05
CTSL3PQ5NE16 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTSL3PQ5NE16 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CTSL3PQ5NE16 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.6■■□□□ 1.05
CTSL3PQ5NE16 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTSL3PQ5NE16 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.6■■□□□ 1.05
CTSL3PQ5NE16 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTSL3PQ5NE16 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CTSL3PQ5NE16 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTSL3PQ5NE16 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.6■■□□□ 1.05
CTSL3PQ5NE16 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CTSL3PQ5NE16 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.6■■□□□ 1.05
CTSL3PQ5NE16 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTSL3PQ5NE16 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTSL3PQ5NE16 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTSL3PQ5NE16 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CTSL3PQ5NE16 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTSL3PQ5NE16 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.6■■□□□ 1.05
CTSL3PQ5NE16 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CTSL3PQ5NE16 UNC93B3-201ENST00000308076 687 ntBASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms