Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.271e-7■■■■□ 19.5
SRSF1Q07955 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.261e-7■■■■□ 19.5
SRSF1Q07955 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.151e-7■■■■□ 19.5
SRSF1Q07955 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.041e-7■■■■□ 19.5
SRSF1Q07955 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.041e-7■■■■□ 19.5
SRSF1Q07955 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.841e-7■■■■□ 19.5
SRSF1Q07955 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC7.2□□□□□ -1.262e-6■■■■□ 19.5
SRSF1Q07955 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.522e-6■■■■□ 19.5
SRSF1Q07955 OAZ1-204ENST00000588673 780 ntTSL 319.08■□□□□ 0.642e-11■■■■□ 19.5
SRSF1Q07955 NFATC2IP-204ENST00000565752 823 ntTSL 221.74■■□□□ 1.073e-7■■■■□ 19.4
SRSF1Q07955 NFATC2IP-205ENST00000565919 576 ntTSL 411.94□□□□□ -0.53e-7■■■■□ 19.4
SRSF1Q07955 ZSWIM8-214ENST00000603187 3713 ntTSL 1 (best)10.97□□□□□ -0.652e-6■■■■□ 19.4
SRSF1Q07955 LINC01578-205ENST00000555227 1078 ntTSL 55.34□□□□□ -1.552e-8■■■■□ 19.4
SRSF1Q07955 LINC01578-202ENST00000554133 1776 ntTSL 23.27□□□□□ -1.892e-8■■■■□ 19.4
SRSF1Q07955 METTL26-210ENST00000565799 716 ntTSL 320.22■□□□□ 0.836e-8■■■■□ 19.4
SRSF1Q07955 METTL26-213ENST00000568830 590 ntTSL 317.95■□□□□ 0.466e-8■■■■□ 19.4
SRSF1Q07955 TTC3-223ENST00000492275 769 ntTSL 323.65■■□□□ 1.385e-7■■■■□ 19.4
SRSF1Q07955 TTC3-212ENST00000463216 842 ntTSL 523.34■■□□□ 1.335e-7■■■■□ 19.4
SRSF1Q07955 TTC3-224ENST00000494243 861 ntTSL 523.29■■□□□ 1.325e-7■■■■□ 19.4
SRSF1Q07955 TTC3-217ENST00000481605 1540 ntTSL 522.49■■□□□ 1.195e-7■■■■□ 19.4
SRSF1Q07955 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.31■□□□□ 0.845e-7■■■■□ 19.4
SRSF1Q07955 TTC3-210ENST00000450533 2451 ntTSL 1 (best)16.74■□□□□ 0.275e-7■■■■□ 19.4
SRSF1Q07955 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.15■□□□□ 0.185e-7■■■■□ 19.4
SRSF1Q07955 TTC3-209ENST00000438055 3606 ntTSL 512.78□□□□□ -0.365e-7■■■■□ 19.4
SRSF1Q07955 TTC3-207ENST00000418766 3771 ntTSL 512.54□□□□□ -0.45e-7■■■■□ 19.4
SRSF1Q07955 TTC3-219ENST00000485402 3626 ntTSL 511.67□□□□□ -0.545e-7■■■■□ 19.4
SRSF1Q07955 TTC3-218ENST00000484047 1945 ntTSL 28.14□□□□□ -1.115e-7■■■■□ 19.4
SRSF1Q07955 TTC3-202ENST00000355666 7712 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.185e-7■■■■□ 19.4
SRSF1Q07955 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.735e-7■■■■□ 19.4
SRSF1Q07955 NINL-204ENST00000461642 594 ntTSL 313.75□□□□□ -0.215e-8■■■■□ 19.3
SRSF1Q07955 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.85e-6■■■■□ 19.3
SRSF1Q07955 ELOVL6-204ENST00000506461 575 ntTSL 49.54□□□□□ -0.885e-6■■■■□ 19.3
SRSF1Q07955 ELOVL6-205ENST00000506625 610 ntTSL 48.19□□□□□ -1.15e-6■■■■□ 19.3
SRSF1Q07955 ELOVL6-203ENST00000503885 458 ntTSL 45.79□□□□□ -1.485e-6■■■■□ 19.3
SRSF1Q07955 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.595e-6■■■■□ 19.3
SRSF1Q07955 ELOVL6-208ENST00000514184 607 ntTSL 33.88□□□□□ -1.795e-6■■■■□ 19.3
SRSF1Q07955 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.24□□□□□ -0.454e-8■■■■□ 19.3
SRSF1Q07955 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC9.99□□□□□ -0.814e-8■■■■□ 19.3
SRSF1Q07955 MCM7-205ENST00000463722 1327 ntTSL 59.89□□□□□ -0.834e-8■■■■□ 19.3
SRSF1Q07955 MCM7-201ENST00000303887 2957 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.944e-8■■■■□ 19.3
SRSF1Q07955 MCM7-210ENST00000489841 2515 ntTSL 1 (best)8.45□□□□□ -1.064e-8■■■■□ 19.3
SRSF1Q07955 TCF25-224ENST00000570116 1947 ntTSL 513.04□□□□□ -0.323e-8■■■■□ 19.3
SRSF1Q07955 GIGYF2-228ENST00000469843 550 ntTSL 49.87□□□□□ -0.838e-8■■■■□ 19.3
SRSF1Q07955 SLC43A3-220ENST00000532278 506 ntTSL 422.12■■□□□ 1.131e-14■■■■□ 19.3
SRSF1Q07955 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.57■□□□□ 0.722e-10■■■■□ 19.3
SRSF1Q07955 ARFRP1-211ENST00000618568 1612 ntTSL 317.83■□□□□ 0.452e-10■■■■□ 19.3
SRSF1Q07955 SLC43A3-224ENST00000533245 589 ntTSL 517.15■□□□□ 0.341e-14■■■■□ 19.3
SRSF1Q07955 SLC43A3-207ENST00000526125 554 ntTSL 517.15■□□□□ 0.341e-14■■■■□ 19.3
SRSF1Q07955 SLC43A3-219ENST00000530316 573 ntTSL 417.15■□□□□ 0.341e-14■■■■□ 19.3
SRSF1Q07955 SLC43A3-213ENST00000529494 560 ntTSL 417.11■□□□□ 0.331e-14■■■■□ 19.3
SRSF1Q07955 SLC43A3-210ENST00000528187 648 ntTSL 516.73■□□□□ 0.271e-14■■■■□ 19.3
SRSF1Q07955 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.34■□□□□ 0.212e-10■■■■□ 19.3
SRSF1Q07955 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.062e-10■■■■□ 19.3
SRSF1Q07955 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.31■□□□□ 0.042e-10■■■■□ 19.3
SRSF1Q07955 SLC43A3-222ENST00000533051 571 ntTSL 214.96□□□□□ -0.011e-14■■■■□ 19.3
SRSF1Q07955 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.54□□□□□ -0.082e-10■■■■□ 19.3
SRSF1Q07955 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.082e-10■■■■□ 19.3
SRSF1Q07955 SLC43A3-211ENST00000529112 653 ntTSL 514.28□□□□□ -0.121e-14■■■■□ 19.3
SRSF1Q07955 SLC43A3-209ENST00000528098 1260 ntTSL 214.28□□□□□ -0.121e-14■■■■□ 19.3
SRSF1Q07955 ARFRP1-204ENST00000609537 593 ntTSL 314.26□□□□□ -0.136e-12■■■■□ 19.3
SRSF1Q07955 SLC43A3-216ENST00000529896 494 ntTSL 413.95□□□□□ -0.181e-14■■■■□ 19.3
SRSF1Q07955 SLC43A3-223ENST00000533235 581 ntTSL 513.8□□□□□ -0.21e-14■■■■□ 19.3
SRSF1Q07955 SLC43A3-221ENST00000532795 587 ntTSL 413.8□□□□□ -0.21e-14■■■■□ 19.3
SRSF1Q07955 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.232e-10■■■■□ 19.3
SRSF1Q07955 SLC43A3-204ENST00000524863 539 ntTSL 312.79□□□□□ -0.361e-14■■■■□ 19.3
SRSF1Q07955 SLC43A3-208ENST00000526621 562 ntTSL 412.79□□□□□ -0.361e-14■■■■□ 19.3
SRSF1Q07955 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.64□□□□□ -0.392e-7■■■■□ 19.3
SRSF1Q07955 GMPS-201ENST00000295920 2024 ntTSL 2 BASIC11.13□□□□□ -0.635e-10■■■■□ 19.3
SRSF1Q07955 SLC43A3-206ENST00000525474 801 ntTSL 510.57□□□□□ -0.721e-14■■■■□ 19.3
SRSF1Q07955 SLC43A3-215ENST00000529748 397 ntTSL 310.3□□□□□ -0.761e-14■■■■□ 19.3
SRSF1Q07955 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.775e-10■■■■□ 19.3
SRSF1Q07955 ARFRP1-201ENST00000424545 384 ntTSL 26.76□□□□□ -1.336e-12■■■■□ 19.3
SRSF1Q07955 UNC93B1-207ENST00000531152 729 ntTSL 326.54■■□□□ 1.844e-6■■■■□ 19.3
SRSF1Q07955 FANCA-228ENST00000567943 860 ntTSL 323.78■■□□□ 1.45e-22■■■■□ 19.3
SRSF1Q07955 UNC93B1-210ENST00000622364 1021 ntTSL 221.95■■□□□ 1.14e-6■■■■□ 19.3
SRSF1Q07955 INAVA-203ENST00000451872 708 ntAPPRIS ALT2 TSL 321.82■■□□□ 1.084e-6■■■■□ 19.3
SRSF1Q07955 ZNF384-205ENST00000417772 1286 ntTSL 520.47■□□□□ 0.874e-6■■■■□ 19.3
SRSF1Q07955 UNC93B1-208ENST00000533424 1275 ntTSL 519.1■□□□□ 0.654e-6■■■■□ 19.3
SRSF1Q07955 EVI5-204ENST00000474806 525 ntTSL 318.92■□□□□ 0.624e-6■■■■□ 19.3
SRSF1Q07955 ZNF384-208ENST00000537248 594 ntTSL 218.8■□□□□ 0.64e-6■■■■□ 19.3
SRSF1Q07955 INAVA-207ENST00000532631 570 ntTSL 318.64■□□□□ 0.574e-6■■■■□ 19.3
SRSF1Q07955 ZNF384-214ENST00000542605 571 ntTSL 418.56■□□□□ 0.564e-6■■■■□ 19.3
SRSF1Q07955 UNC93B1-206ENST00000530138 821 ntTSL 218.52■□□□□ 0.564e-6■■■■□ 19.3
SRSF1Q07955 BARD1-208ENST00000479904 573 ntTSL 417.65■□□□□ 0.424e-6■■■■□ 19.3
SRSF1Q07955 ZNF384-206ENST00000436774 1096 ntTSL 317.6■□□□□ 0.414e-6■■■■□ 19.3
SRSF1Q07955 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.46e-7■■■■□ 19.3
SRSF1Q07955 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.32e-6■■■■□ 19.3
SRSF1Q07955 ORC6-207ENST00000569239 1833 ntTSL 216.8■□□□□ 0.284e-6■■■■□ 19.3
SRSF1Q07955 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.264e-6■■■■□ 19.3
SRSF1Q07955 FANCA-212ENST00000563513 571 ntTSL 416.6■□□□□ 0.255e-22■■■■□ 19.3
SRSF1Q07955 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.21■□□□□ 0.192e-6■■■■□ 19.3
SRSF1Q07955 ORC6-208ENST00000570260 561 ntTSL 216.14■□□□□ 0.174e-6■■■■□ 19.3
SRSF1Q07955 ORC6-202ENST00000563306 1190 ntTSL 216.14■□□□□ 0.174e-6■■■■□ 19.3
SRSF1Q07955 OXA1L-204ENST00000431881 889 ntTSL 315.91■□□□□ 0.144e-6■■■■□ 19.3
SRSF1Q07955 USP15-216ENST00000550632 728 ntTSL 315.88■□□□□ 0.134e-7■■■■□ 19.3
SRSF1Q07955 EVI5-202ENST00000466778 321 ntTSL 315.68■□□□□ 0.14e-6■■■■□ 19.3
SRSF1Q07955 TAF15-204ENST00000603427 547 ntTSL 415.3■□□□□ 0.044e-6■■■■□ 19.3
SRSF1Q07955 CDK11A-202ENST00000356937 2275 ntTSL 1 (best)15.08■□□□□ 01e-7■■■■□ 19.3
SRSF1Q07955 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.93□□□□□ -0.024e-6■■■■□ 19.3
SRSF1Q07955 ORC6-203ENST00000563599 681 ntTSL 514.91□□□□□ -0.024e-6■■■■□ 19.3
Retrieved 100 of 14,836 protein–RNA pairs in 19.4 ms