Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.25■□□□□ 0.35
CCL20P78556 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.25■□□□□ 0.35
CCL20P78556 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.25■□□□□ 0.35
CCL20P78556 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.25■□□□□ 0.35
CCL20P78556 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL20P78556 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCL20P78556 AC060814.1-201ENST00000554326 538 ntBASIC17.25■□□□□ 0.35
CCL20P78556 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.25■□□□□ 0.35
CCL20P78556 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL20P78556 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCL20P78556 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCL20P78556 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL20P78556 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
CCL20P78556 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL20P78556 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL20P78556 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL20P78556 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL20P78556 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL20P78556 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL20P78556 Z98882.1-201ENST00000622160 2253 ntBASIC17.24■□□□□ 0.35
CCL20P78556 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL20P78556 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.24■□□□□ 0.35
CCL20P78556 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CCL20P78556 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL20P78556 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL20P78556 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL20P78556 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.24■□□□□ 0.35
CCL20P78556 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL20P78556 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL20P78556 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCL20P78556 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCL20P78556 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL20P78556 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL20P78556 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL20P78556 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.23■□□□□ 0.35
CCL20P78556 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.23■□□□□ 0.35
CCL20P78556 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL20P78556 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.23■□□□□ 0.35
CCL20P78556 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL20P78556 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL20P78556 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CCL20P78556 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL20P78556 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.23■□□□□ 0.35
CCL20P78556 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL20P78556 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL20P78556 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL20P78556 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL20P78556 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL20P78556 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL20P78556 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.22■□□□□ 0.35
CCL20P78556 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.22■□□□□ 0.35
CCL20P78556 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.22■□□□□ 0.35
CCL20P78556 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL20P78556 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.22■□□□□ 0.35
CCL20P78556 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.22■□□□□ 0.35
CCL20P78556 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL20P78556 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCL20P78556 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.21■□□□□ 0.35
CCL20P78556 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL20P78556 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL20P78556 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.21■□□□□ 0.35
CCL20P78556 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.21■□□□□ 0.35
CCL20P78556 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL20P78556 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL20P78556 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCL20P78556 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.21■□□□□ 0.35
CCL20P78556 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL20P78556 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL20P78556 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.21■□□□□ 0.35
CCL20P78556 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL20P78556 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.21■□□□□ 0.34
CCL20P78556 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCL20P78556 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCL20P78556 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL20P78556 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCL20P78556 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL20P78556 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL20P78556 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL20P78556 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL20P78556 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCL20P78556 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCL20P78556 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCL20P78556 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL20P78556 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.2■□□□□ 0.34
CCL20P78556 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL20P78556 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL20P78556 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CCL20P78556 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL20P78556 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.19■□□□□ 0.34
CCL20P78556 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCL20P78556 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL20P78556 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.19■□□□□ 0.34
CCL20P78556 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL20P78556 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.19■□□□□ 0.34
CCL20P78556 AC092296.2-201ENST00000589470 999 ntBASIC17.19■□□□□ 0.34
CCL20P78556 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL20P78556 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL20P78556 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.19■□□□□ 0.34
CCL20P78556 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.19■□□□□ 0.34
CCL20P78556 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms