Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRPXP78539 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SRPXP78539 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
SRPXP78539 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRPXP78539 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRPXP78539 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRPXP78539 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.02■□□□□ 0.48
SRPXP78539 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRPXP78539 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SRPXP78539 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRPXP78539 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.02■□□□□ 0.48
SRPXP78539 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.02■□□□□ 0.48
SRPXP78539 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRPXP78539 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRPXP78539 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SRPXP78539 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SRPXP78539 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SRPXP78539 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SRPXP78539 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SRPXP78539 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRPXP78539 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SRPXP78539 AF131216.4-201ENST00000638924 1588 ntBASIC18.01■□□□□ 0.47
SRPXP78539 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SRPXP78539 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRPXP78539 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.01■□□□□ 0.47
SRPXP78539 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.01■□□□□ 0.47
SRPXP78539 AC120024.1-201ENST00000562672 995 ntBASIC18.01■□□□□ 0.47
SRPXP78539 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.01■□□□□ 0.47
SRPXP78539 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.01■□□□□ 0.47
SRPXP78539 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.01■□□□□ 0.47
SRPXP78539 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRPXP78539 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SRPXP78539 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRPXP78539 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
SRPXP78539 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SRPXP78539 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
SRPXP78539 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18■□□□□ 0.47
SRPXP78539 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SRPXP78539 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SRPXP78539 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18■□□□□ 0.47
SRPXP78539 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18■□□□□ 0.47
SRPXP78539 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18■□□□□ 0.47
SRPXP78539 LINC01960-201ENST00000563759 1884 ntBASIC18■□□□□ 0.47
SRPXP78539 AC244015.2-201ENST00000616358 1861 ntBASIC18■□□□□ 0.47
SRPXP78539 LINC01529-204ENST00000636474 1715 ntBASIC18■□□□□ 0.47
SRPXP78539 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SRPXP78539 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SRPXP78539 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRPXP78539 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SRPXP78539 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.99■□□□□ 0.47
SRPXP78539 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRPXP78539 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRPXP78539 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SRPXP78539 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.99■□□□□ 0.47
SRPXP78539 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRPXP78539 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.99■□□□□ 0.47
SRPXP78539 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SRPXP78539 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.99■□□□□ 0.47
SRPXP78539 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.99■□□□□ 0.47
SRPXP78539 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SRPXP78539 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRPXP78539 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.99■□□□□ 0.47
SRPXP78539 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRPXP78539 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRPXP78539 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRPXP78539 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRPXP78539 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SRPXP78539 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SRPXP78539 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRPXP78539 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.98■□□□□ 0.47
SRPXP78539 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRPXP78539 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRPXP78539 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.98■□□□□ 0.47
SRPXP78539 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.98■□□□□ 0.47
SRPXP78539 MIR4281-201ENST00000580852 62 ntBASIC17.98■□□□□ 0.47
SRPXP78539 FP325331.1-202ENST00000623531 1380 ntBASIC17.98■□□□□ 0.47
SRPXP78539 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.98■□□□□ 0.47
SRPXP78539 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRPXP78539 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRPXP78539 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.98■□□□□ 0.47
SRPXP78539 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRPXP78539 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRPXP78539 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SRPXP78539 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SRPXP78539 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.97■□□□□ 0.47
SRPXP78539 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.97■□□□□ 0.47
SRPXP78539 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRPXP78539 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
SRPXP78539 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRPXP78539 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SRPXP78539 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRPXP78539 AC139795.1-202ENST00000500444 432 ntBASIC17.97■□□□□ 0.47
SRPXP78539 THA1P-201ENST00000590384 1145 ntBASIC17.97■□□□□ 0.47
SRPXP78539 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SRPXP78539 AC009086.3-201ENST00000623486 1008 ntBASIC17.97■□□□□ 0.47
SRPXP78539 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SRPXP78539 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SRPXP78539 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.96■□□□□ 0.47
SRPXP78539 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SRPXP78539 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms