Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAE1P78406 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAE1P78406 AC133637.1-201ENST00000624115 1537 ntBASIC20.88■□□□□ 0.93
RAE1P78406 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAE1P78406 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.87■□□□□ 0.93
RAE1P78406 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.87■□□□□ 0.93
RAE1P78406 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
RAE1P78406 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RAE1P78406 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAE1P78406 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAE1P78406 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAE1P78406 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAE1P78406 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.87■□□□□ 0.93
RAE1P78406 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.87■□□□□ 0.93
RAE1P78406 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.87■□□□□ 0.93
RAE1P78406 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.87■□□□□ 0.93
RAE1P78406 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAE1P78406 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.87■□□□□ 0.93
RAE1P78406 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAE1P78406 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAE1P78406 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RAE1P78406 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.86■□□□□ 0.93
RAE1P78406 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
RAE1P78406 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAE1P78406 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAE1P78406 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAE1P78406 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.86■□□□□ 0.93
RAE1P78406 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.86■□□□□ 0.93
RAE1P78406 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.86■□□□□ 0.93
RAE1P78406 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.86■□□□□ 0.93
RAE1P78406 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.86■□□□□ 0.93
RAE1P78406 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAE1P78406 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.86■□□□□ 0.93
RAE1P78406 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAE1P78406 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAE1P78406 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAE1P78406 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.85■□□□□ 0.93
RAE1P78406 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAE1P78406 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAE1P78406 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAE1P78406 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAE1P78406 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.85■□□□□ 0.93
RAE1P78406 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAE1P78406 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.85■□□□□ 0.93
RAE1P78406 MIR3181-201ENST00000578512 73 ntBASIC20.85■□□□□ 0.93
RAE1P78406 MIR4466-201ENST00000606121 54 ntBASIC20.85■□□□□ 0.93
RAE1P78406 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.85■□□□□ 0.93
RAE1P78406 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RAE1P78406 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.85■□□□□ 0.93
RAE1P78406 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAE1P78406 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAE1P78406 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAE1P78406 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
RAE1P78406 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
RAE1P78406 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAE1P78406 C11orf96-202ENST00000528572 1834 ntBASIC20.85■□□□□ 0.93
RAE1P78406 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.84■□□□□ 0.93
RAE1P78406 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAE1P78406 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
RAE1P78406 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.84■□□□□ 0.93
RAE1P78406 SRD5A1P1-201ENST00000442297 786 ntBASIC20.84■□□□□ 0.93
RAE1P78406 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.84■□□□□ 0.93
RAE1P78406 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
RAE1P78406 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAE1P78406 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAE1P78406 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.84■□□□□ 0.93
RAE1P78406 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAE1P78406 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAE1P78406 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAE1P78406 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAE1P78406 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.83■□□□□ 0.93
RAE1P78406 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAE1P78406 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.83■□□□□ 0.93
RAE1P78406 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.83■□□□□ 0.93
RAE1P78406 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.83■□□□□ 0.93
RAE1P78406 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
RAE1P78406 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAE1P78406 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAE1P78406 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RAE1P78406 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
RAE1P78406 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RAE1P78406 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RAE1P78406 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
RAE1P78406 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.82■□□□□ 0.92
RAE1P78406 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.82■□□□□ 0.92
RAE1P78406 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAE1P78406 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAE1P78406 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAE1P78406 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAE1P78406 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.82■□□□□ 0.92
RAE1P78406 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RAE1P78406 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAE1P78406 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.82■□□□□ 0.92
RAE1P78406 AL031602.1-201ENST00000633169 911 ntBASIC20.82■□□□□ 0.92
RAE1P78406 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAE1P78406 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.82■□□□□ 0.92
RAE1P78406 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.81■□□□□ 0.92
RAE1P78406 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAE1P78406 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RAE1P78406 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms