Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
NR1H2P55055 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NR1H2P55055 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.63■□□□□ 0.89
NR1H2P55055 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NR1H2P55055 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NR1H2P55055 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NR1H2P55055 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.63■□□□□ 0.89
NR1H2P55055 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NR1H2P55055 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NR1H2P55055 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NR1H2P55055 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NR1H2P55055 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.63■□□□□ 0.89
NR1H2P55055 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NR1H2P55055 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
NR1H2P55055 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NR1H2P55055 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.63■□□□□ 0.89
NR1H2P55055 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H2P55055 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.62■□□□□ 0.89
NR1H2P55055 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H2P55055 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H2P55055 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H2P55055 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H2P55055 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H2P55055 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H2P55055 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H2P55055 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.62■□□□□ 0.89
NR1H2P55055 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.62■□□□□ 0.89
NR1H2P55055 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H2P55055 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.62■□□□□ 0.89
NR1H2P55055 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.62■□□□□ 0.89
NR1H2P55055 MIR4787-201ENST00000607364 84 ntBASIC20.62■□□□□ 0.89
NR1H2P55055 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H2P55055 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H2P55055 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H2P55055 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NR1H2P55055 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NR1H2P55055 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.61■□□□□ 0.89
NR1H2P55055 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.61■□□□□ 0.89
NR1H2P55055 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
NR1H2P55055 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NR1H2P55055 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NR1H2P55055 AC120024.1-201ENST00000562672 995 ntBASIC20.61■□□□□ 0.89
NR1H2P55055 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NR1H2P55055 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NR1H2P55055 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NR1H2P55055 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NR1H2P55055 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
NR1H2P55055 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NR1H2P55055 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.61■□□□□ 0.89
NR1H2P55055 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NR1H2P55055 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
NR1H2P55055 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NR1H2P55055 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NR1H2P55055 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NR1H2P55055 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NR1H2P55055 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NR1H2P55055 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NR1H2P55055 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NR1H2P55055 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
NR1H2P55055 AC137630.3-201ENST00000607245 391 ntBASIC20.6■□□□□ 0.89
NR1H2P55055 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NR1H2P55055 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NR1H2P55055 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NR1H2P55055 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.6■□□□□ 0.89
NR1H2P55055 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NR1H2P55055 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
NR1H2P55055 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NR1H2P55055 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
NR1H2P55055 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
NR1H2P55055 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NR1H2P55055 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.59■□□□□ 0.89
NR1H2P55055 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NR1H2P55055 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NR1H2P55055 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.59■□□□□ 0.89
NR1H2P55055 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.59■□□□□ 0.89
NR1H2P55055 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.59■□□□□ 0.89
NR1H2P55055 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.59■□□□□ 0.89
NR1H2P55055 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
NR1H2P55055 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NR1H2P55055 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NR1H2P55055 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
NR1H2P55055 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
NR1H2P55055 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NR1H2P55055 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NR1H2P55055 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.58■□□□□ 0.89
NR1H2P55055 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.58■□□□□ 0.89
NR1H2P55055 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
NR1H2P55055 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NR1H2P55055 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NR1H2P55055 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NR1H2P55055 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NR1H2P55055 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
NR1H2P55055 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NR1H2P55055 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NR1H2P55055 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.57■□□□□ 0.88
NR1H2P55055 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NR1H2P55055 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NR1H2P55055 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NR1H2P55055 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NR1H2P55055 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms