Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 SET1YHR119W 3243 nt3.35□□□□□ -1.87
SSU72P53538 KAP95YLR347C 2586 nt3.35□□□□□ -1.87
SSU72P53538 YDR149CYDR149C 708 nt3.35□□□□□ -1.87
SSU72P53538 DSD1YGL196W 1287 nt3.35□□□□□ -1.87
SSU72P53538 UPS2YLR168C 693 nt3.35□□□□□ -1.87
SSU72P53538 NCE103YNL036W 666 nt3.35□□□□□ -1.87
SSU72P53538 VAM10YOR068C 345 nt3.35□□□□□ -1.87
SSU72P53538 PNG1YPL096W 1092 nt3.35□□□□□ -1.87
SSU72P53538 PEX1YKL197C 3132 nt3.35□□□□□ -1.87
SSU72P53538 SEA4YBL104C 3117 nt3.34□□□□□ -1.87
SSU72P53538 KRI1YNL308C 1776 nt3.34□□□□□ -1.87
SSU72P53538 KRE28YDR532C 1158 nt3.34□□□□□ -1.87
SSU72P53538 RPB3YIL021W 957 nt3.34□□□□□ -1.87
SSU72P53538 UTP23YOR004W 765 nt3.34□□□□□ -1.87
SSU72P53538 YPL071CYPL071C 471 nt3.34□□□□□ -1.87
SSU72P53538 RPN2YIL075C 2838 nt3.34□□□□□ -1.87
SSU72P53538 HER2YMR293C 1395 nt3.34□□□□□ -1.88
SSU72P53538 SER3YER081W 1410 nt3.34□□□□□ -1.88
SSU72P53538 MSK1YNL073W 1731 nt3.33□□□□□ -1.88
SSU72P53538 LCB5YLR260W 2064 nt3.33□□□□□ -1.88
SSU72P53538 YEL032C-AYEL032C-A 162 nt3.33□□□□□ -1.88
SSU72P53538 ERJ5YFR041C 888 nt3.33□□□□□ -1.88
SSU72P53538 SPT4YGR063C 309 nt3.33□□□□□ -1.88
SSU72P53538 OKP1YGR179C 1221 nt3.33□□□□□ -1.88
SSU72P53538 ACP1YKL192C 378 nt3.33□□□□□ -1.88
SSU72P53538 VPS71YML041C 843 nt3.33□□□□□ -1.88
SSU72P53538 SNO1YMR095C 675 nt3.33□□□□□ -1.88
SSU72P53538 CMR3YPR013C 954 nt3.33□□□□□ -1.88
SSU72P53538 GSC2YGR032W 5688 nt3.33□□□□□ -1.88
SSU72P53538 CTF18YMR078C 2226 nt3.33□□□□□ -1.88
SSU72P53538 YMR111CYMR111C 1389 nt3.33□□□□□ -1.88
SSU72P53538 GDH2YDL215C 3279 nt3.33□□□□□ -1.88
SSU72P53538 FAS1YKL182W 6156 nt3.32□□□□□ -1.88
SSU72P53538 RAD5YLR032W 3510 nt3.32□□□□□ -1.88
SSU72P53538 SPC19YDR201W 498 nt3.32□□□□□ -1.88
SSU72P53538 YHL026CYHL026C 948 nt3.32□□□□□ -1.88
SSU72P53538 YIR040CYIR040C 333 nt3.32□□□□□ -1.88
SSU72P53538 YAL065CYAL065C 387 nt3.32□□□□□ -1.88
SSU72P53538 SEC72YLR292C 582 nt3.32□□□□□ -1.88
SSU72P53538 DSS4YPR017C 432 nt3.32□□□□□ -1.88
SSU72P53538 YPR077CYPR077C 372 nt3.32□□□□□ -1.88
SSU72P53538 ALG1YBR110W 1350 nt3.32□□□□□ -1.88
SSU72P53538 DIT2YDR402C 1470 nt3.32□□□□□ -1.88
SSU72P53538 YGL140CYGL140C 3660 nt3.32□□□□□ -1.88
SSU72P53538 FLO9YAL063C 3969 nt3.31□□□□□ -1.88
SSU72P53538 ERG9YHR190W 1335 nt3.31□□□□□ -1.88
SSU72P53538 LSM1YJL124C 519 nt3.31□□□□□ -1.88
SSU72P53538 SOP4YJL192C 705 nt3.31□□□□□ -1.88
SSU72P53538 SOD1YJR104C 465 nt3.31□□□□□ -1.88
SSU72P53538 YLR402WYLR402W 192 nt3.31□□□□□ -1.88
SSU72P53538 NIS1YNL078W 1224 nt3.31□□□□□ -1.88
SSU72P53538 FSH3YOR280C 801 nt3.31□□□□□ -1.88
SSU72P53538 MLH2YLR035C 2088 nt3.31□□□□□ -1.88
SSU72P53538 SIR1YKR101W 1965 nt3.31□□□□□ -1.88
SSU72P53538 FOX2YKR009C 2703 nt3.3□□□□□ -1.88
SSU72P53538 YNR065CYNR065C 3351 nt3.3□□□□□ -1.88
SSU72P53538 NFI1YOR156C 2181 nt3.3□□□□□ -1.88
SSU72P53538 YCL075WYCL075W 441 nt3.3□□□□□ -1.88
SSU72P53538 PPA2YMR267W 933 nt3.3□□□□□ -1.88
SSU72P53538 CPR8YNR028W 927 nt3.3□□□□□ -1.88
SSU72P53538 YBR056W-AYBR056W-A 201 nt3.3□□□□□ -1.88
SSU72P53538 UBP12YJL197W 3765 nt3.3□□□□□ -1.88
SSU72P53538 SPT6YGR116W 4356 nt3.3□□□□□ -1.88
SSU72P53538 MNT4YNR059W 1743 nt3.3□□□□□ -1.88
SSU72P53538 HDA2YDR295C 2025 nt3.29□□□□□ -1.88
SSU72P53538 SLM2YNL047C 1971 nt3.29□□□□□ -1.88
SSU72P53538 NEM1YHR004C 1341 nt3.29□□□□□ -1.88
SSU72P53538 YDL242WYDL242W 354 nt3.29□□□□□ -1.88
SSU72P53538 RTN1YDR233C 888 nt3.29□□□□□ -1.88
SSU72P53538 YFT2YDR319C 825 nt3.29□□□□□ -1.88
SSU72P53538 API2YDR525W 330 nt3.29□□□□□ -1.88
SSU72P53538 BNA1YJR025C 534 nt3.29□□□□□ -1.88
SSU72P53538 YMR114CYMR114C 1107 nt3.29□□□□□ -1.88
SSU72P53538 IZH2YOL002C 954 nt3.29□□□□□ -1.88
SSU72P53538 RIB5YBR256C 717 nt3.29□□□□□ -1.88
SSU72P53538 PGS1YCL004W 1566 nt3.29□□□□□ -1.88
SSU72P53538 RSC58YLR033W 1509 nt3.29□□□□□ -1.88
SSU72P53538 BUD6YLR319C 2367 nt3.28□□□□□ -1.88
SSU72P53538 YJR038CYJR038C 363 nt3.28□□□□□ -1.88
SSU72P53538 YAR023CYAR023C 540 nt3.28□□□□□ -1.88
SSU72P53538 GCD7YLR291C 1146 nt3.28□□□□□ -1.88
SSU72P53538 PRM2YIL037C 1971 nt3.28□□□□□ -1.88
SSU72P53538 SKN7YHR206W 1869 nt3.28□□□□□ -1.88
SSU72P53538 AVT7YIL088C 1473 nt3.28□□□□□ -1.88
SSU72P53538 PRP3YDR473C 1410 nt3.27□□□□□ -1.89
SSU72P53538 VPS27YNR006W 1869 nt3.27□□□□□ -1.89
SSU72P53538 SWH1YAR042W 3567 nt3.27□□□□□ -1.89
SSU72P53538 YDR230WYDR230W 348 nt3.27□□□□□ -1.89
SSU72P53538 YDR246W-AYDR246W-A 201 nt3.27□□□□□ -1.89
SSU72P53538 BUR6YER159C 429 nt3.27□□□□□ -1.89
SSU72P53538 MRP13YGR084C 1020 nt3.27□□□□□ -1.89
SSU72P53538 YHR214C-EYHR214C-E 300 nt3.27□□□□□ -1.89
SSU72P53538 GAT3YLR013W 426 nt3.27□□□□□ -1.89
SSU72P53538 YAR070CYAR070C 300 nt3.27□□□□□ -1.89
SSU72P53538 PEX12YMR026C 1200 nt3.27□□□□□ -1.89
SSU72P53538 TMC1YOR052C 453 nt3.27□□□□□ -1.89
SSU72P53538 PEP4YPL154C 1218 nt3.27□□□□□ -1.89
SSU72P53538 GDT1YBR187W 843 nt3.27□□□□□ -1.89
SSU72P53538 YMR018WYMR018W 1545 nt3.27□□□□□ -1.89
SSU72P53538 ISW2YOR304W 3363 nt3.27□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 17.6 ms