Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RNF144AP50876 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RNF144AP50876 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF144AP50876 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF144AP50876 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF144AP50876 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF144AP50876 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF144AP50876 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF144AP50876 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF144AP50876 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF144AP50876 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF144AP50876 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF144AP50876 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF144AP50876 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF144AP50876 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RNF144AP50876 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF144AP50876 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF144AP50876 AL136116.3-201ENST00000402907 1138 ntBASIC20.29■□□□□ 0.84
RNF144AP50876 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF144AP50876 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF144AP50876 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF144AP50876 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF144AP50876 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RNF144AP50876 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
RNF144AP50876 AC080038.3-201ENST00000623346 1952 ntBASIC20.28■□□□□ 0.84
RNF144AP50876 AC087742.1-201ENST00000575880 1738 ntBASIC20.28■□□□□ 0.84
RNF144AP50876 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF144AP50876 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.28■□□□□ 0.84
RNF144AP50876 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF144AP50876 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF144AP50876 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF144AP50876 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF144AP50876 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF144AP50876 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF144AP50876 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF144AP50876 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF144AP50876 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF144AP50876 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF144AP50876 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF144AP50876 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF144AP50876 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF144AP50876 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF144AP50876 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF144AP50876 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF144AP50876 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF144AP50876 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RNF144AP50876 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF144AP50876 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF144AP50876 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF144AP50876 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RNF144AP50876 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
RNF144AP50876 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
RNF144AP50876 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RNF144AP50876 LINC01960-201ENST00000563759 1884 ntBASIC20.26■□□□□ 0.83
RNF144AP50876 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RNF144AP50876 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF144AP50876 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RNF144AP50876 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF144AP50876 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF144AP50876 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF144AP50876 MIR3181-201ENST00000578512 73 ntBASIC20.26■□□□□ 0.83
RNF144AP50876 AC241377.3-202ENST00000626088 1088 ntBASIC20.26■□□□□ 0.83
RNF144AP50876 AC241585.3-202ENST00000628937 1088 ntBASIC20.26■□□□□ 0.83
RNF144AP50876 AC245100.8-202ENST00000629247 1058 ntBASIC20.26■□□□□ 0.83
RNF144AP50876 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RNF144AP50876 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF144AP50876 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF144AP50876 LINC00526-201ENST00000581067 1875 ntBASIC20.26■□□□□ 0.83
RNF144AP50876 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF144AP50876 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF144AP50876 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF144AP50876 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF144AP50876 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF144AP50876 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF144AP50876 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF144AP50876 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF144AP50876 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF144AP50876 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF144AP50876 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF144AP50876 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF144AP50876 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF144AP50876 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF144AP50876 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF144AP50876 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF144AP50876 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF144AP50876 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF144AP50876 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF144AP50876 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF144AP50876 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF144AP50876 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF144AP50876 AC127496.7-201ENST00000625110 1798 ntBASIC20.24■□□□□ 0.83
RNF144AP50876 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF144AP50876 AC133637.1-201ENST00000624115 1537 ntBASIC20.24■□□□□ 0.83
RNF144AP50876 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF144AP50876 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.24■□□□□ 0.83
RNF144AP50876 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF144AP50876 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF144AP50876 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF144AP50876 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF144AP50876 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms